RNA–Protein interactions for RNA: ENST00000544810.5

CNGA1-209, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CNGA1, Length 2,722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-209ENST00000544810 ZBTB26Q9HCK0 441 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CCM2LQ9NUG4 571 aaPredicted RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 C2orf42Q9NWW7 574 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 MID2Q9UJV3 735 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 FBXW11Q9UKB1 542 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 EMCNQ9ULC0 261 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 KIAA1257Q9ULG3 409 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CNOT6Q9ULM6 557 aaKnown RBP4.55□□□□□ -1.68
CNGA1-209ENST00000544810 ST14Q9Y5Y6 855 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 PIAS3Q9Y6X2 628 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 A3GALT2U3KPV4 340 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 CNTNAP2Q9UHC6 1331 aa4.55□□□□□ -1.68
CNGA1-209ENST00000544810 TCRBV16S1A1N1A0A5B0 115 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 LNP1A1A4G5 178 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 HEATR9A2RTY3 570 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 GOLGA8SH3BPF8 625 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 AP3B1O00203 1094 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 SOCS2O14508 198 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 MEIS2O14770 477 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 UPK1BO75841 260 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 TSPAN9O75954 239 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 GABARAPO95166 117 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 IL18RAPO95256 599 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 DLGAP3O95886 979 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PCNAP12004 261 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 RPL17P18621 184 aaKnown RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FCARP24071 287 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 HOXA9P31269 272 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 IGFALSP35858 605 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 DDOSTP39656 456 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 EIF2DP41214 584 aaKnown RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 MAGEA3P43357 314 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 RAD23AP54725 363 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 COPZ1P61923 177 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 DPYSL3Q14195 570 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PIGHQ14442 188 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 POU4F3Q15319 338 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 LLGL1Q15334 1064 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 STILQ15468 1287 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PGS1Q32NB8 556 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 C5orf22Q49AR2 442 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 AGAP6Q5VW22 663 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FAM160B1Q5W0V3 765 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 XAF1Q6GPH4 301 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 TANGO2Q6ICL3 276 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ZNF544Q6NX49 715 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FAM122CQ6P4D5 195 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 USP37Q86T82 979 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 GPR65Q8IYL9 337 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 SCML4Q8N228 414 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 CLIP4Q8N3C7 705 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FAM109AQ8N4B1 249 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 DHRSXQ8N5I4 330 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 MYCT1Q8N699 235 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PPM1NQ8N819 430 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 XXYLT1Q8NBI6 393 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 GALNT11Q8NCW6 608 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 RHOXF1Q8NHV9 184 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ING5Q8WYH8 240 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 CDKL2Q92772 493 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ELSPBP1Q96BH3 223 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 RCN3Q96D15 328 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 RTP4Q96DX8 246 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ZNF668Q96K58 619 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ZNF560Q96MR9 790 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 AGAP4Q96P64 663 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 VPS35Q96QK1 796 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 UBL7Q96S82 380 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 CPXM1Q96SM3 734 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 CIB1Q99828 191 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 TRAF4Q9BUZ4 470 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 BRD9Q9H8M2 597 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FANCEQ9HB96 536 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 POPDC2Q9HBU9 364 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 MRM3Q9HC36 420 aaKnown RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 TMEM8AQ9HCN3 771 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 TMEM9BQ9NQ34 198 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 C20orf96Q9NUD7 363 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PNPOQ9NVS9 261 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FNIP2Q9P278 1114 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 KLQ9UEF7 1012 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 CD300AQ9UGN4 299 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ZNF221Q9UK13 617 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 SLC6A14Q9UN76 642 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 AKT3Q9Y243 479 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PRG3Q9Y2Y8 225 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 VWA7Q9Y334 891 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 NAALAD2Q9Y3Q0 740 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 SPEF1Q9Y4P9 236 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 GREB1Q4ZG55 1949 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ITPR1Q14643 2758 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 COL4A2P08572 1712 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 HMX2A2RU54 273 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 FAM25EA8MYX2 175 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 ZNF623O75123 536 aa4.54□□□□□ -1.68
CNGA1-209ENST00000544810 BCAS1O75363 584 aaPredicted RBP4.54□□□□□ -1.68
CNGA1-209ENST00000544810 LYPLA1O75608 230 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms