RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ANKARQ7Z5J8 1434 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 PIK3C2AO00443 1686 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 NUP188Q5SRE5 1749 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 LINC01553A4QN01 128 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 HS3ST1O14792 307 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 NDUFS4O43181 175 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ERCC2P18074 760 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ITGB8P26012 769 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 HOXA11P31270 313 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 CTNNA1P35221 906 aaKnown RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 GP5P40197 560 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 HNRNPKP61978 463 aaKnown RBP eCLIP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 COG7P83436 770 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 BNC1Q01954 994 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 PXDC1Q5TGL8 231 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 LRCH2Q5VUJ6 765 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 FIGLAQ6QHK4 219 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 TPRG1Q6ZUI0 275 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 MRPL10Q7Z7H8 261 aaKnown RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 GLRX5Q86SX6 157 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 TMEM173Q86WV6 379 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 TTC30BQ8N4P2 665 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 CAMKVQ8NCB2 501 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 TSPAN14Q8NG11 270 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ASB5Q8WWX0 329 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ERLEC1Q96DZ1 483 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 SPACA9Q96E40 222 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 CFAP57Q96MR6 1250 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 PRAM1Q96QH2 718 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ABHD6Q9BV23 337 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 RSPH9Q9H1X1 276 aaPredicted RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ELOVL5Q9NYP7 299 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 GTF3C4Q9UKN8 822 aa3.64□□□□□ -1.83
SCFD1-207ENST00000544052 ATXN2Q99700 1313 aaKnown RBP3.64□□□□□ -1.83
SCFD1-207ENST00000544052 PEAK1Q9H792 1746 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 OR6C75A6NL08 312 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PPEF2O14830 753 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SLC7A4O43246 635 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 RECQL5O94762 991 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 OR52Z1P0C646 297 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ACHEP22303 614 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 CD38P28907 300 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 CORO1AP31146 461 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 NPY4RP50391 375 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 RAB28P51157 221 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 RBP5P82980 135 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ROR2Q01974 943 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 KLHL26Q53HC5 615 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ARMC4Q5T2S8 1044 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 BRAT1Q6PJG6 821 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 RAD9BQ6WBX8 426 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 IRF2BP2Q7Z5L9 587 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 CENPVQ7Z7K6 275 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 GPR180Q86V85 440 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 METTL23Q86XA0 190 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF575Q86XF7 245 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 DNAJC10Q8IXB1 793 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PGBD5Q8N414 524 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 WFIKKN2Q8TEU8 576 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 HDAC11Q96DB2 347 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PRMT6Q96LA8 375 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ZNF558Q96NG5 402 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 MTERF1Q99551 399 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SLC25A33Q9BSK2 321 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 C16orf70Q9BSU1 422 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 NUP85Q9BW27 656 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SEMA6AQ9H2E6 1030 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 NOL11Q9H8H0 719 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 TBC1D17Q9HA65 648 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 MBNL1Q9NR56 388 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 MCM9Q9NXL9 1143 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 C1RLQ9NZP8 487 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 RHCGQ9UBD6 479 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 DDX25Q9UHL0 483 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 LRP5O75197 1615 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SBNO1A3KN83 1393 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 MON2Q7Z3U7 1717 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 HEPACAM2A8MVW5 462 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 TO15178 435 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SLC16A5O15375 505 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PRAMEF11O60813 436 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ATP5BP06576 529 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 CYP11B2P19099 503 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PRKCIP41743 596 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 AMTP48728 403 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 CLCNKAP51800 687 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 POLGP54098 1239 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 BRWD1-AS2P59051 145 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 NANOS3P60323 173 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SEC61BP60468 96 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 KRT83P78385 493 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 Q0VFX4 171 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 TRAF3Q13114 568 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 MELKQ14680 651 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SETMARQ53H47 684 aaPredicted RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 ZDHHC20Q5W0Z9 365 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 TECPR1Q7Z6L1 1165 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 PIM3Q86V86 326 aa3.63□□□□□ -1.83
SCFD1-207ENST00000544052 CCAR2Q8N163 923 aaKnown RBP3.63□□□□□ -1.83
SCFD1-207ENST00000544052 SLC5A8Q8N695 610 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms