RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 MPZL2O60487 215 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 HPGDP15428 266 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 PORP16435 677 aaPredicted RBP19.08■□□□□ 0.65
SUDS3-204ENST00000543473 CERS6Q6ZMG9 384 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 LAPTM4BQ86VI4 370 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 TMEM74Q96NL1 305 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 SLC39A8Q9C0K1 460 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 USP29Q9HBJ7 922 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 S100A9P06702 114 aaKnown RBP19.08■□□□□ 0.65
SUDS3-204ENST00000543473 PRPS2P11908 318 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 KBTBD6Q86V97 674 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 TRPV1Q8NER1 839 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 CSGALNACT1Q8TDX6 532 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 GTPBP3Q969Y2 492 aaKnown RBP19.08■□□□□ 0.65
SUDS3-204ENST00000543473 MUS81Q96NY9 551 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 ZDHHC6Q9H6R6 413 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 PADI3Q9ULW8 664 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 ZNF232Q9UNY5 417 aa19.08■□□□□ 0.65
SUDS3-204ENST00000543473 MYCLP1P12525 358 aaPredicted RBP19.08■□□□□ 0.64
SUDS3-204ENST00000543473 BMP7P18075 431 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 OGNP20774 298 aaKnown RBP19.08■□□□□ 0.64
SUDS3-204ENST00000543473 PBX3P40426 434 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 SLC15A1P46059 708 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 LILRA4P59901 499 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 RPS14P62263 151 aaKnown RBP19.08■□□□□ 0.64
SUDS3-204ENST00000543473 PLD1Q13393 1074 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 RPS27LQ71UM5 84 aaKnown RBP19.08■□□□□ 0.64
SUDS3-204ENST00000543473 AARSD1Q9BTE6 412 aaKnown RBP19.08■□□□□ 0.64
SUDS3-204ENST00000543473 TOR3AQ9H497 397 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 EXD2Q9NVH0 621 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 C1orf109Q9NX04 203 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.08■□□□□ 0.64
SUDS3-204ENST00000543473 IRGMA1A4Y4 181 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 NOTOA8MTQ0 251 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 IL1BP01584 269 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 MYBPC3Q14896 1274 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 C1orf220Q5T0J3 134 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 BRSK1Q8TDC3 778 aa19.08■□□□□ 0.64
SUDS3-204ENST00000543473 OR51F1A6NGY5 319 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 CCRL2O00421 344 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 MAGEB3O15480 346 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 BUD31P41223 144 aaPredicted RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 TUSC3Q13454 348 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SETMARQ53H47 684 aaPredicted RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 CLIP4Q8N3C7 705 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 NTAN1Q96AB6 310 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 PRICKLE1Q96MT3 831 aaPredicted RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 TEPSINQ96N21 525 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 BRD9Q9H8M2 597 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 MCUBQ9NWR8 336 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ARHGEF33A8MVX0 844 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ORC5O43913 435 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 IFNW1P05000 195 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ARSFP54793 590 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SNRPD1P62314 119 aaKnown RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SNAPC1Q16533 368 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 GPAT3Q53EU6 434 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 FAM92BQ6ZTR7 304 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 OOSP2Q86WS3 158 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 VANGL1Q8TAA9 524 aaPredicted RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 PCED1BQ96HM7 432 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ZNF558Q96NG5 402 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 DNAJC11Q9NVH1 559 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 GDAP2Q9NXN4 497 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 EBF1Q9UH73 591 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SPEF1Q9Y4P9 236 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 RAI2Q9Y5P3 530 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 NT5C1B-RDH14C9J2C7 533 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 POLR2EP19388 210 aaKnown RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 DNAJB1P25685 340 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SP2Q02086 613 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ZNF404Q494X3 552 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SLC45A3Q96JT2 553 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 PCP4L1A6NKN8 68 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 MAGEB17A8MXT2 336 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 UGT2B17O75795 530 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 HDCP19113 662 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SCNN1AP37088 669 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ASMTP46597 345 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 DGKQP52824 942 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 RBM20Q5T481 1227 aaKnown RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 TMEM53Q6P2H8 277 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 PAQR3Q6TCH7 311 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SIDT2Q8NBJ9 832 aaKnown RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 AURKBQ96GD4 344 aaPredicted RBP19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ZNF347Q96SE7 839 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 PIGVQ9NUD9 493 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ZIM2Q9NZV7 527 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 ASB3Q9Y575 518 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 C5P01031 1676 aa19.07■□□□□ 0.64
SUDS3-204ENST00000543473 SNNO75324 88 aaPredicted RBP19.06■□□□□ 0.64
SUDS3-204ENST00000543473 GUCY1B2O75343 617 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 INMTO95050 263 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 CDH5P33151 784 aaPredicted RBP19.06■□□□□ 0.64
SUDS3-204ENST00000543473 SLC2A7Q6PXP3 512 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 TPGS1Q6ZTW0 290 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 GPR152Q8TDT2 470 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 ANKRD49Q8WVL7 239 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 HMCESQ96FZ2 354 aa19.06■□□□□ 0.64
SUDS3-204ENST00000543473 FAIMQ9NVQ4 179 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms