RNA–Protein interactions for RNA: ENST00000542698.1

PRKAB1-207, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 1 (best)

Gene PRKAB1, Length 4,019 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-207ENST00000542698 PEX13Q92968 403 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 MAGEB10Q96LZ2 347 aaPredicted RBP8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 TMEM248Q9NWD8 314 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 CLN6Q9NWW5 311 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 RIMS3Q9UJD0 308 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 ERGIC3Q9Y282 383 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 LTBP3Q9NS15 1303 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 DLEC1Q9Y238 1755 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 PRSS51A0A1B0GVH4 220 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 hCG_2039718K7EN88 272 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 TRBC1P01850 177 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 FABP3P05413 133 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 C7P10643 843 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 HSD17B1P14061 328 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 IL12AP29459 219 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 RFC2P35250 354 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 OLR1P78380 273 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 EMX2Q04743 252 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 ELP6Q0PNE2 266 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 GRIK2Q13002 908 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 TP53BP2Q13625 1128 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 KCNA10Q16322 511 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 CCL14Q16627 93 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 TRIM40Q6P9F5 258 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 DOK6Q6PKX4 331 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 METTL3Q86U44 580 aaKnown RBP8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 SMYD1Q8NB12 490 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 PIK3C3Q8NEB9 887 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 OR4F6Q8NGB9 312 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 CAPSLQ8WWF8 208 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 AURKBQ96GD4 344 aaPredicted RBP8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 ABHD8Q96I13 439 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 TMEM165Q9HC07 324 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 DNAJC11Q9NVH1 559 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 POLR3BQ9NW08 1133 aaPredicted RBP8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 UBAP1Q9NZ09 502 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 CRNNQ9UBG3 495 aaPredicted RBP8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 CDC14AQ9UNH5 594 aa8.08□□□□□ -1.12
PRKAB1-207ENST00000542698 MEIS3P2A8K0S8 358 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 NME4O00746 187 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 MYL12BO14950 172 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 FOXD2O60548 495 aaPredicted RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ABCB7O75027 752 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 PGRP06401 933 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CYP2A6P11509 494 aaPredicted RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 MYCLP1P12525 358 aaPredicted RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 PCSK2P16519 638 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 FLT3LGP49771 235 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 SPIBQ01892 262 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 RAB39AQ14964 217 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ARHGAP15Q53QZ3 475 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ANXA8L1Q5VT79 327 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 SPRYD7Q5W111 196 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 COLGALT2Q8IYK4 626 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CMTR2Q8IYT2 770 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 TCAIMQ8N3R3 496 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CSGALNACT1Q8TDX6 532 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 TAMM41Q96BW9 452 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 POPDC3Q9HBV1 291 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 GIMAP4Q9NUV9 329 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 RAPGEFL1Q9UHV5 662 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 OGDHLQ9ULD0 1010 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 BTAF1O14981 1849 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 AIREO43918 545 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CLPXO76031 633 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 RASAL1O95294 804 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 EOMESO95936 686 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 MYL12AP19105 171 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 PRKACGP22612 351 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 SPAM1P38567 509 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CTSKP43235 329 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 KCNQ1P51787 676 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 TUBA3CQ13748 450 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 GRB14Q14449 540 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 UPP1Q16831 310 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 AGMOQ6ZNB7 445 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 R3HCC1LQ7Z5L2 792 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 DNAJB8Q8NHS0 232 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 GRIN3AQ8TCU5 1115 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ASZ1Q8WWH4 475 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ZNF597Q96LX8 424 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 RANBP9Q96S59 729 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 PAAF1Q9BRP4 392 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 NLNQ9BYT8 704 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ANKRD60Q9BZ19 345 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ZCCHC2Q9C0B9 1178 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 KAT8Q9H7Z6 458 aaKnown RBP8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 SMURF2Q9HAU4 748 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 ARMC1Q9NVT9 282 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 VPS4AQ9UN37 437 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 LOC100130705A0A1B0GUX0 176 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 SH3PXD2BA1X283 911 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 IQCF5A8MTL0 148 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 H0YAE9 185 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 CYP11A1P05108 521 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 C8BP07358 591 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 IL7RP16871 459 aa8.07□□□□□ -1.12
PRKAB1-207ENST00000542698 KCNA5P22460 613 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms