RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 CBSP35520 551 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 CTSCP53634 463 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 AQP5P55064 265 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 RPS21P63220 83 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 SFSWAPQ12872 951 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 BOP1Q14137 746 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 PFKFB4Q16877 469 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 KIAA1324Q6UXG2 1013 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 RAB44Q7Z6P3 723 aaPredicted RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 ADAMTSL2Q86TH1 951 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 KBTBD6Q86V97 674 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 GPSM1Q86YR5 675 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 KBTBD2Q8IY47 623 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.53□□□□□ -1.04
THBS3-210ENST00000541576 RASGEF1AQ8N9B8 481 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 MRGPRX1Q96LB2 322 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 CADM1Q9BY67 442 aaKnown RBP8.53□□□□□ -1.04
THBS3-210ENST00000541576 DCLRE1BQ9H816 532 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 NCKAP1Q9Y2A7 1128 aa8.53□□□□□ -1.04
THBS3-210ENST00000541576 TCRBV21S2A2A0A5A6 115 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 LRRC14BA6NHZ5 514 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 KPNA5O15131 536 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 NPHS1O60500 1241 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 CDK14O94921 469 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 ENO3P13929 434 aaPredicted RBP8.52□□□□□ -1.04
THBS3-210ENST00000541576 NDUFV2P19404 249 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 IMPDH1P20839 514 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 MPSTP25325 297 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 SERPINB3P29508 390 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 SERPINB5P36952 375 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 ADPRHP54922 357 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 HSPA14Q0VDF9 509 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 AGERQ15109 404 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 WSCD2Q2TBF2 565 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 OR52E8Q6IFG1 317 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 KIAA1161Q6NSJ0 714 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 USP30Q70CQ3 517 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 FRA10AC1Q70Z53 315 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 MYLK4Q86YV6 388 aaPredicted RBP8.52□□□□□ -1.04
THBS3-210ENST00000541576 WDR75Q8IWA0 830 aaKnown RBP8.52□□□□□ -1.04
THBS3-210ENST00000541576 FBXO39Q8N4B4 442 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 BEND7Q8N7W2 519 aaPredicted RBP8.52□□□□□ -1.04
THBS3-210ENST00000541576 PLA2G15Q8NCC3 412 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 AGR3Q8TD06 166 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 ELMO1Q92556 727 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 CNDP1Q96KN2 507 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 EBF4Q9BQW3 602 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 OSBPL6Q9BZF3 934 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 FZD4Q9ULV1 537 aa8.52□□□□□ -1.04
THBS3-210ENST00000541576 DOCK9Q9BZ29 2069 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 A0A1W2PQU0 124 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 EIF3FO00303 357 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 ATG13O75143 517 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 SIX3O95343 332 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 PCCBP05166 539 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ATP6V1B1P15313 513 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PRLHRP49683 370 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 HK3P52790 923 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 HERVK_113P63132 956 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PRKCQQ04759 706 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 SGCGQ13326 291 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ZRSR2Q15696 482 aaKnown RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 CNPY1Q3B7I2 92 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 FBXO48Q5FWF7 155 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PLEKHS1Q5SXH7 462 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 FAM219BQ5XKK7 198 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PNCKQ6P2M8 343 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TMEM220Q6QAJ8 160 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ADAMTSL4Q6UY14 1074 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 Q6ZS52 159 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 FAM124AQ86V42 546 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ADHFE1Q8IWW8 467 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 L3HYPDHQ96EM0 354 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 HIC2Q96JB3 615 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 LENG8Q96PV6 779 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 ERVK-6Q9BXR3 956 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ILKAPQ9H0C8 392 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 OR2AG1Q9H205 316 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 LRMDAQ9H2I8 198 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TRIM39Q9HCM9 518 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PRDM6Q9NQX0 595 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 KCNK4Q9NYG8 393 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 UTP6Q9NYH9 597 aaKnown RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 ZDHHC2Q9UIJ5 367 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PACSIN3Q9UKS6 424 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 ZFR2Q9UPR6 939 aaKnown RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 LRCH1Q9Y2L9 728 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 RAP2CQ9Y3L5 183 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3DA0A087WVF3 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3IA0A087WXS9 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3EA0A087X179 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3KA0A087X1G2 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3FA6NER0 549 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 NCF1BA6NI72 391 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 NCF1CA8MVU1 366 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 MEI4A8MW99 385 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 TBC1D3LB9A6J9 549 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 LIN7AO14910 233 aaPredicted RBP8.52□□□□□ -1.05
THBS3-210ENST00000541576 SNX2O60749 519 aa8.52□□□□□ -1.05
THBS3-210ENST00000541576 PAK4O96013 591 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms