RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 FGF19O95750 216 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 MT-ND1P03886 318 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 DCKP27707 260 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 HOXA9P31269 272 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 RTL10Q7L3V2 364 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 CHST15Q7LFX5 561 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 PTRH1Q86Y79 214 aaKnown RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.292e-7■■■■■ 62.8
SPIDR-227ENST00000541342 AARSD1Q9BTE6 412 aaKnown RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 PLGRKTQ9HBL7 147 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 INTS10Q9NVR2 710 aaKnown RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 CHCHD3Q9NX63 227 aaKnown RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 FNDC3AQ9Y2H6 1198 aaKnown RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF711Q9Y462 761 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 TRIM64BA6NI03 449 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 ZSCAN9O15535 394 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 SRCP12931 536 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 MC4RP32245 332 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 ESRRGP62508 458 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 C16orf72Q14CZ0 275 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 GEN1Q17RS7 908 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 SETMARQ53H47 684 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 ARMC12Q5T9G4 340 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 TBPL2Q6SJ96 375 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 USP51Q70EK9 711 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 SNRNP27Q8WVK2 155 aaKnown RBP16.89■□□□□ 0.29
SPIDR-227ENST00000541342 TANKQ92844 425 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 FAM210AQ96ND0 272 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 ALG2Q9H553 416 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 FADS3Q9Y5Q0 445 aa16.89■□□□□ 0.29
SPIDR-227ENST00000541342 NEDD8-MDP1E9PL57 170 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 GPR39O43194 453 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 SNAP29O95721 258 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 PRR35P0CG20 571 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 LBPP18428 481 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 PRDX3P30048 256 aaKnown RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 POLR2IP36954 125 aaKnown RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 YAP1P46937 504 aaKnown RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 RCAN2Q14206 197 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF77Q15935 545 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ARHGAP15Q53QZ3 475 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 COQ5Q5HYK3 327 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 FGD3Q5JSP0 725 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 IFNEQ86WN2 208 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 TMEM74Q96NL1 305 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF225Q9UK10 706 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 STX7O15400 261 aaKnown RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 CLOCKO15516 846 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 GPIP06744 558 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 FOXM1Q08050 763 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 TMTC4Q5T4D3 741 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 TMEM26Q6ZUK4 368 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 RBM23Q86U06 439 aaKnown RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ZSWIM9Q86XI8 627 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 PAPD5Q8NDF8 572 aaKnown RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ING5Q8WYH8 240 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF707Q96C28 371 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 SLC30A3Q99726 388 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 IL17CQ9P0M4 197 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 FAF1Q9UNN5 650 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 A0A1W2PPW3 197 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 UBA6A0AVT1 1052 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 CA3P07451 260 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 TFPTP0C1Z6 253 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 C7P10643 843 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 FMO4P31512 558 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 CSNK1DP48730 415 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 BCL2L1Q07817 233 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
SPIDR-227ENST00000541342 GPR107Q5VW38 600 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 RHEBL1Q8TAI7 183 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ASB2Q96Q27 587 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 TRIM54Q9BYV2 358 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 MAGEE1Q9HCI5 957 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 CD320Q9NPF0 282 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 ZNF639Q9UID6 485 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 TIMM22Q9Y584 194 aa16.88■□□□□ 0.29
SPIDR-227ENST00000541342 A0A1W2PP18 115 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 OR1I1O60431 355 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 INHBBP09529 407 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 HNRNPA1P09651 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 IDO1P14902 403 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 CEBPBP17676 345 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 CAPGP40121 348 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 LIPEQ05469 1076 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 AARS2Q5JTZ9 985 aaKnown RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 C9orf50Q5SZB4 431 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 PATL1Q86TB9 770 aaKnown RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 CROCCP3Q8IVE0 287 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 SMYD1Q8NB12 490 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 SEMA4BQ9NPR2 832 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 FAIMQ9NVQ4 179 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 GID8Q9NWU2 228 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 SMPD3Q9NY59 655 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 XIRP2A4UGR9 3374 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 H7C0S8 307 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 HRH2P25021 359 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 EEF1DP29692 281 aaKnown RBP16.87■□□□□ 0.29
SPIDR-227ENST00000541342 CLCQ05315 142 aa16.87■□□□□ 0.29
SPIDR-227ENST00000541342 ABRAXAS1Q6UWZ7 409 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms