RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 AGAP2Q99490 1192 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RBM4BQ9BQ04 359 aaKnown RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 FEM1AQ9BSK4 669 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 DCUN1D5Q9BTE7 237 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RBM4Q9BWF3 364 aaKnown RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 NACA2Q9H009 215 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 SMG9Q9H0W8 520 aaKnown RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 PCDHAC1Q9H158 963 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CHRDQ9H2X0 955 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ARNT2Q9HBZ2 717 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CHRAC1Q9NRG0 131 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 SDR39U1Q9NRG7 319 aaPredicted RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 TMLHEQ9NVH6 421 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 POLR3BQ9NW08 1133 aaPredicted RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 USE1Q9NZ43 259 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 ZIM2Q9NZV7 527 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 AFF4Q9UHB7 1163 aaKnown RBP10.26□□□□□ -0.77
CHFR-219ENST00000541341 DAPK2Q9UIK4 370 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RAB23Q9ULC3 237 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 RIMKLBQ9ULI2 386 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TPRKBQ9Y3C4 175 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 TSC22D4Q9Y3Q8 395 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 PCDHB3Q9Y5E6 796 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 CEP192Q8TEP8 1941 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 THADAQ6YHU6 1953 aa10.26□□□□□ -0.77
CHFR-219ENST00000541341 GPR179Q6PRD1 2367 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ADAMTS9Q9P2N4 1935 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 F5P12259 2224 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 C1orf232A0A0U1RR37 186 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CCDC154A6NI56 674 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 A8MT66 165 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 M0QX08 132 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 M0R3G1 203 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 MAN2B1O00754 1011 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 AZIN1O14977 448 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ZBTB24O43167 697 aaPredicted RBP10.25□□□□□ -0.77
CHFR-219ENST00000541341 HRO43593 1189 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CRCPO75575 148 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 GSNP06396 782 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CHRNB1P11230 501 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 IL1RNP18510 177 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 SERPINB1P30740 379 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ARHGDIAP52565 204 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CYP4F8P98187 520 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CDC20Q12834 499 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ORC1Q13415 861 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 DAG1Q14118 895 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 SIM2Q14190 667 aaPredicted RBP10.25□□□□□ -0.77
CHFR-219ENST00000541341 GK3PQ14409 553 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 PLA2G4EQ3MJ16 856 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 SLC39A12Q504Y0 691 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CYBRD1Q53TN4 286 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 AARS2Q5JTZ9 985 aaKnown RBP10.25□□□□□ -0.77
CHFR-219ENST00000541341 BRMS1LQ5PSV4 323 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 SLX4IPQ5VYV7 408 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 BLOC1S3Q6QNY0 202 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 FAM131BQ86XD5 332 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ADGRG5Q8IZF4 528 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 C12orf29Q8N999 325 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ATAD1Q8NBU5 361 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 HEXDCQ8WVB3 486 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 FCGR1BQ92637 280 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 NELL1Q92832 810 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 SLC35B4Q969S0 331 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ZNF566Q969W8 418 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 MYLPFQ96A32 169 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 TAMM41Q96BW9 452 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 BTN2A3PQ96KV6 586 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 MARK4Q96L34 752 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CEP295NLQ96MC4 621 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 LRRC3BQ96PB8 259 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 LPIN3Q9BQK8 851 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 FSD1LQ9BXM9 530 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 LRRC3Q9BY71 257 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 B3GNT5Q9BYG0 378 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ATXN3LQ9H3M9 355 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ALG2Q9H553 416 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 TFB2MQ9H5Q4 396 aaKnown RBP10.25□□□□□ -0.77
CHFR-219ENST00000541341 CAB39LQ9H9S4 337 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 CSNK1G1Q9HCP0 422 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 FBXO8Q9NRD0 319 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 SCN3BQ9NY72 215 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 ERVW-1Q9UQF0 538 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 VWA7Q9Y334 891 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 PCDHB5Q9Y5E4 795 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 MYO18AQ92614 2054 aaKnown RBP10.25□□□□□ -0.77
CHFR-219ENST00000541341 MYOFQ9NZM1 2061 aa10.25□□□□□ -0.77
CHFR-219ENST00000541341 MN1Q10571 1320 aaPredicted RBP10.25□□□□□ -0.77
CHFR-219ENST00000541341 CROCCQ5TZA2 2017 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 SPTBN2O15020 2390 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 PNMA8CA0A1B0GUJ8 204 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 CENPBD1B2RD01 187 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 STX16-NPEPL1H3BU86 382 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 K7EPI3 171 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 TAF4O00268 1085 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 ARPC2O15144 300 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 MATN3O15232 486 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 UGT2B11O75310 529 aa10.24□□□□□ -0.77
CHFR-219ENST00000541341 EEDO75530 441 aaKnown RBP10.24□□□□□ -0.77
CHFR-219ENST00000541341 PRSS23O95084 383 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms