RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 MTPNP58546 118 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 ERVK-8P63133 956 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 PLIN5Q00G26 463 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 EMX2Q04743 252 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 SELPLGQ14242 412 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 AAK1Q2M2I8 961 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 C6orf136Q5SQH8 315 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 TPGS2Q68CL5 300 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 FAM43BQ6ZT52 329 aaPredicted RBP12.32□□□□□ -0.44
RNF4-222ENST00000541204 ANKRD33Q7Z3H0 272 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 HS6ST3Q8IZP7 471 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 PEX13Q92968 403 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 PPP1R14BQ96C90 147 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 NSMCE2Q96MF7 247 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 PPM1MQ96MI6 270 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 LRRC3Q9BY71 257 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 GPR63Q9BZJ6 419 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 TNKS2Q9H2K2 1166 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 FANCEQ9HB96 536 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 TBC1D23Q9NUY8 699 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 EIF2B4Q9UI10 523 aaKnown RBP12.32□□□□□ -0.44
RNF4-222ENST00000541204 OGDHLQ9ULD0 1010 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 ANKRD36A6QL64 1941 aa12.32□□□□□ -0.44
RNF4-222ENST00000541204 PRRC2BQ5JSZ5 2229 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 TYW5A2RUC4 315 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 ENO2P09104 434 aaPredicted RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 TCF3P15923 654 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 UGT1A1P22309 533 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 UGT1A4P22310 534 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 SHMT2P34897 504 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 UGT1A3P35503 534 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 UGT1A5P35504 534 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 ARL1P40616 181 aaPredicted RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 PSMD7P51665 324 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 HK3P52790 923 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 GRIK2Q13002 908 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 ZNF829Q3KNS6 432 aaPredicted RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 PDCD4Q53EL6 469 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 ANKRD26P1Q6NSI1 321 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 CNKSR3Q6P9H4 555 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 TRIM74Q86UV6 250 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 TRIM73Q86UV7 250 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 PROSER1Q86XN7 944 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 ZC3H7AQ8IWR0 971 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 OR52B6Q8NGF0 335 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 BPIFB1Q8TDL5 484 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 EEF1AKMT1Q8WVE0 214 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 EID2BQ96D98 161 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 NUSAP1Q9BXS6 441 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 LHX3Q9UBR4 397 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 EVLQ9UI08 416 aaPredicted RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 ARIH1Q9Y4X5 557 aaPredicted RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 PCDHGA11Q9Y5H2 935 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 FAM234BA2RU67 622 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 E5RI56 91 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 BOLA2-SMG1P6H3BVE0 249 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 MLYCDO95822 493 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 IMPDH2P12268 514 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 ARSFP54793 590 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 NCEH1Q6PIU2 408 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 FAM151BQ6UXP7 276 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 HID1Q8IV36 788 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 RIMKLAQ8IXN7 391 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 DTWD1Q8N5C7 304 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 BORCS5Q969J3 196 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 ISG20Q96AZ6 181 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 MRPL17Q9NRX2 175 aaKnown RBP12.31□□□□□ -0.44
RNF4-222ENST00000541204 TBCCD1Q9NVR7 557 aa12.31□□□□□ -0.44
RNF4-222ENST00000541204 UPK1AO00322 258 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 STX16O14662 325 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 MAP4P27816 1152 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 C21orf59P57076 290 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ATP6AP1LQ52LC2 224 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CTSL3PQ5NE16 218 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 Q6ZSR9 355 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 GPRIN3Q6ZVF9 776 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 OTOP2Q7RTS6 562 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CLEC4FQ8N1N0 589 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 TERB1Q8NA31 727 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 OR13F1Q8NGS4 319 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 SGCDQ92629 289 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 TMBIM1Q969X1 311 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ACDQ96AP0 544 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 LINGO1Q96FE5 620 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 TRMT2BQ96GJ1 504 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 PLEKHA8Q96JA3 519 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 YME1L1Q96TA2 773 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ING2Q9H160 280 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ABCG8Q9H221 673 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 LTB4R2Q9NPC1 389 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 SPG21Q9NZD8 308 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CD274Q9NZQ7 290 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 ZIM2Q9NZV7 527 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 CFAP97Q9P2B7 532 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 H0YAE9 185 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 E2F3O00716 465 aa12.3□□□□□ -0.44
RNF4-222ENST00000541204 NOL3O60936 208 aaKnown RBP12.3□□□□□ -0.44
RNF4-222ENST00000541204 RSL1D1O76021 490 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms