RNA–Protein interactions for RNA: ENST00000540683.1

CDCA3-208, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 985 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-208ENST00000540683 TUBB4BP68371 445 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 PRAMEP78395 509 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 XIAPP98170 497 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 CDK16Q00536 496 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 TUBB3Q13509 450 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 TUBB2AQ13885 445 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 POU6F1Q14863 301 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 CCNG2Q16589 344 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SYTL3Q4VX76 610 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 CAPRIN2Q6IMN6 1127 aaKnown RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DENND5AQ6IQ26 1287 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DRICH1Q6PGQ1 229 aaPredicted RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 AFTPHQ6ULP2 937 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 PACS1Q6VY07 963 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 FAM92BQ6ZTR7 304 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DET1Q7L5Y6 550 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 GSTA5Q7RTV2 222 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 RAB42Q8N4Z0 105 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 PHC3Q8NDX5 983 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 PPHLN1Q8NEY8 458 aaKnown RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 OR13C4Q8NGS5 318 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DENND1AQ8TEH3 1009 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 CDKN2AIPNLQ96HQ2 116 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SGSM3Q96HU1 749 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SLC41A2Q96JW4 573 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DPH2Q9BQC3 489 aaPredicted RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DESI2Q9BSY9 194 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 TUBB2BQ9BVA1 445 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 WWP1Q9H0M0 922 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 C1GALT1Q9NS00 363 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SLC24A2Q9UI40 661 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 LNPEPQ9UIQ6 1025 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 G3BP2Q9UN86 482 aaKnown RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 PSMD13Q9UNM6 376 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 DRG1Q9Y295 367 aaKnown RBP10.14□□□□□ -0.79
CDCA3-208ENST00000540683 WDR37Q9Y2I8 494 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 RPS6KL1Q9Y6S9 549 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 SDK2Q58EX2 2172 aa10.14□□□□□ -0.79
CDCA3-208ENST00000540683 PIEZO2Q9H5I5 2752 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 MROH6A6NGR9 719 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 C2orf74A8MZ97 194 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 J3QKU1 62 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 GAPDHSO14556 408 aaPredicted RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 LIASO43766 372 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 CPNE3O75131 537 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 MSL3P1P0C860 447 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 CDH3P22223 829 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 PSMA3P25788 255 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SHMT2P34897 504 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 TTPAP49638 278 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 GFERP55789 205 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 RPS15P62841 145 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 TMED2Q15363 201 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 TBR1Q16650 682 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 FASTKD1Q53R41 847 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 TTC23LQ6PF05 361 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SERPINA9Q86WD7 417 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SLC13A5Q86YT5 568 aaPredicted RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 MPP5Q8N3R9 675 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 APOBEC4Q8WW27 367 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 RSC1A1Q92681 617 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 N4BP2L2Q92802 583 aaPredicted RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 DNAJC1Q96KC8 554 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 INSM2Q96T92 566 aaPredicted RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 CTRCQ99895 268 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 GORASP1Q9BQQ3 440 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SLC12A9Q9BXP2 914 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SPRY4Q9C004 299 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SLC25A18Q9H1K4 315 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 TFB2MQ9H5Q4 396 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 C10orf88Q9H8K7 445 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 COG4Q9H9E3 785 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 EIF2B3Q9NR50 452 aaKnown RBP10.13□□□□□ -0.79
CDCA3-208ENST00000540683 LATS2Q9NRM7 1088 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 RAB6BQ9NRW1 208 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SOHLH2Q9NX45 425 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 OGFRQ9NZT2 677 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 SERTAD3Q9UJW9 196 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
CDCA3-208ENST00000540683 GCN1Q92616 2671 aaKnown RBP10.12□□□□□ -0.79
CDCA3-208ENST00000540683 OR6C74A6NCV1 312 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 SPAG6O75602 509 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 METTL18O95568 372 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 POLBP06746 335 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 APRTP07741 180 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 DLSTP36957 453 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 LEPRP48357 1165 aaKnown RBP10.12□□□□□ -0.79
CDCA3-208ENST00000540683 NPY2RP49146 381 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 TMPRSS15P98073 1019 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 CDC20Q12834 499 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 MSLNQ13421 630 aaPredicted RBP10.12□□□□□ -0.79
CDCA3-208ENST00000540683 SEMA5AQ13591 1074 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 LY6DQ14210 128 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 SPARCL1Q14515 664 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 OASLQ15646 514 aaKnown RBP10.12□□□□□ -0.79
CDCA3-208ENST00000540683 DNAJC21Q5F1R6 531 aaKnown RBP10.12□□□□□ -0.79
CDCA3-208ENST00000540683 MEI1Q5TIA1 1274 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 ATG14Q6ZNE5 492 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 LRRC6Q86X45 466 aa10.12□□□□□ -0.79
CDCA3-208ENST00000540683 TMEM126BQ8IUX1 230 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms