RNA–Protein interactions for RNA: ENST00000540539.5

CLIP1-214, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2 BASIC

Gene CLIP1, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-214ENST00000540539 HES5Q5TA89 166 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 MAP1SQ66K74 1059 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-214ENST00000540539 SEL1L3Q68CR1 1132 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 SLC6A19Q695T7 634 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 REP15Q6BDI9 236 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 LAYNQ6UX15 382 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ZYG11AQ6WRX3 759 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 RBM23Q86U06 439 aaKnown RBP9.32□□□□□ -0.92
CLIP1-214ENST00000540539 AQP12AQ8IXF9 295 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ZBTB18Q99592 522 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 SH2D3AQ9BRG2 576 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GLIS2Q9BZE0 524 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GPR63Q9BZJ6 419 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ZNF518BQ9C0D4 1074 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 OSGEPL1Q9H4B0 414 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 CATSPERZQ9NTU4 200 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 EXD2Q9NVH0 621 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TMEM260Q9NX78 707 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 RDH8Q9NYR8 311 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GLS2Q9UI32 602 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 PLCL2Q9UPR0 1127 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 PNMA8CA0A1B0GUJ8 204 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 A0A1B0GVM2 712 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 MTMR11A4FU01 709 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 SLC30A4O14863 429 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TBC1D4O60343 1298 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 HUS1O60921 280 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GDF11O95390 407 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GCNT3O95395 438 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ALDOAP04075 364 aaKnown RBP9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TGFBR2P37173 567 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 MASP1P48740 699 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GLUD2P49448 558 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 EPHA5P54756 1037 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 SLC12A3P55017 1021 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 DSG2Q14126 1118 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TOMM20Q15388 145 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 HYIQ5T013 277 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 DCAF15Q66K64 600 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 PYHIN1Q6K0P9 492 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 PKN3Q6P5Z2 889 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TRMT10BQ6PF06 316 aaKnown RBP9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TIFABQ6ZNK6 161 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 C17orf107Q6ZR85 190 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ELP4Q96EB1 424 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 ACOX2Q99424 681 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 REEP2Q9BRK0 252 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 KIFC3Q9BVG8 833 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TTLL2Q9BWV7 592 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 BRD9Q9H8M2 597 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 POPDC2Q9HBU9 364 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 GREB1LQ9C091 1923 aaPredicted RBP9.32□□□□□ -0.92
CLIP1-214ENST00000540539 PLIN4Q96Q06 1357 aa9.32□□□□□ -0.92
CLIP1-214ENST00000540539 TRABD2BA6NFA1 517 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 MROH6A6NGR9 719 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 DBX1A6NMT0 343 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 B4DXG7 233 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 XPNPEP2O43895 674 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 PCDHGA12O60330 932 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CNTN5O94779 1100 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 HTR3BO95264 441 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CYBBP04839 570 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CHRNGP07510 517 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 ACSM4P0C7M7 580 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 THRBP10828 461 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CD36P16671 472 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CD53P19397 219 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 PTAFRP25105 342 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 HLA-DMAP28067 261 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 KCNJ5P48544 419 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 STARP49675 285 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 NRLP54845 237 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 PSMC5P62195 406 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 FADDQ13158 208 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 HSD17B12Q53GQ0 312 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CCDC190Q86UF4 302 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 TNS4Q8IZW8 715 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 AMER2Q8N7J2 671 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 OR6S1Q8NH40 331 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 EXOC2Q96KP1 924 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 COPS4Q9BT78 406 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 HEXA-AS1Q9H8Q6 139 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 RAB20Q9NX57 234 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 COPZ2Q9P299 210 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 EGFL7Q9UHF1 273 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 FZD1Q9UP38 647 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 VPS9D1Q9Y2B5 631 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 FKBP7Q9Y680 259 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 SSC5DA1L4H1 1573 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 TPP1O14773 563 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 ZBTB24O43167 697 aaPredicted RBP9.31□□□□□ -0.92
CLIP1-214ENST00000540539 HEXBP07686 556 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 TNNI1P19237 187 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CHMP24386 653 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 RARRES1P49788 294 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 CAPZA1P52907 286 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 ARSFP54793 590 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 YWHAZP63104 245 aaKnown RBP9.31□□□□□ -0.92
CLIP1-214ENST00000540539 JAG1P78504 1218 aa9.31□□□□□ -0.92
CLIP1-214ENST00000540539 PUDPQ08623 228 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms