RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 ACTR3BQ9P1U1 418 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 UBA2Q9UBT2 640 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 ENPP5Q9UJA9 477 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 KLHL20Q9Y2M5 609 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 PRR33A8MZF0 331 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 C9JVG2 144 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 EEF2KO00418 725 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 TGM5O43548 720 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 KATNA1O75449 491 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 UPK1BO75841 260 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 PTTG1O95997 202 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 UMPSP11172 480 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 PRKACAP17612 351 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 RUNX1T1Q06455 604 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 ATP6AP1Q15904 470 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 HIST2H2ACQ16777 129 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 ZNF404Q494X3 552 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 GPR158Q5T848 1215 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 PPP1R26Q5T8A7 1209 aaPredicted RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 TPGS2Q68CL5 300 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 PMF1Q6P1K2 205 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 GPR149Q86SP6 731 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 SPARTQ8N0X7 666 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 SNX18Q96RF0 628 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 MKRN2Q9H000 416 aaKnown RBP8.57□□□□□ -1.04
DDB1-217ENST00000540166 DCSTAMPQ9H295 470 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 STAP1Q9ULZ2 295 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
DDB1-217ENST00000540166 F5P12259 2224 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 CACNA1HO95180 2353 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ANKRD12Q6UB98 2062 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 INMTO95050 263 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PGLSO95336 258 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 EDN1P05305 212 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ATP5F1P24539 256 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 PLIN5Q00G26 463 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ZP2Q05996 745 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TBRG1Q3YBR2 411 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 C6orf141Q5SZD1 244 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 AGAP9Q5VTM2 703 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 CCDC185Q8N715 623 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 OR13J1Q8NGT2 312 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ZNF461Q8TAF7 563 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 HDAC2Q92769 488 aaKnown RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 FAM162AQ96A26 154 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TNIP3Q96KP6 325 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PHOX2BQ99453 314 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 KXD1Q9BQD3 176 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ZSCAN5AQ9BUG6 496 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 NFKBIZQ9BYH8 718 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ALG2Q9H553 416 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 LSM7Q9UK45 103 aaKnown RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 CDH9Q9ULB4 789 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ZFP37Q9Y6Q3 630 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 HMX2A2RU54 273 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 CCDC182A6NF36 153 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 M0QYT0 321 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ZNF195O14628 629 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 JRKO75564 520 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 ABCB1P08183 1280 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 PRKCAP17252 672 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PAMP19021 973 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TGM1P22735 817 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 FMO4P31512 558 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PPP2R2BQ00005 443 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TPRG1LQ5T0D9 272 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 FAM35AQ86V20 835 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 SDR16C5Q8N3Y7 309 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 FSTL5Q8N475 847 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 PQLC3Q8N755 202 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PIK3C3Q8NEB9 887 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 OR6Q1Q8NGQ2 317 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 FEM1AQ9BSK4 669 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 XYLT2Q9H1B5 865 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 RIBC2Q9H4K1 309 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 NECTIN3Q9NQS3 549 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 UCKL1Q9NWZ5 548 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 SIT1Q9Y3P8 196 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 PCDHGA10Q9Y5H3 936 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 SNX8Q9Y5X2 465 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 EP300Q09472 2414 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 TCF20Q9UGU0 1960 aaKnown RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 TCRBV5S1A1TA0A578 114 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TYW5A2RUC4 315 aaKnown RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 CCDC154A6NI56 674 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 MYO1GB0I1T2 1018 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 B8ZZF3 427 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 AGRPO00253 132 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 DNAJB5O75953 348 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 HSMCR30P0CW71 290 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TSPAN8P19075 237 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 HOXA11P31270 313 aaPredicted RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 PTPN9P43378 593 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 LHX1P48742 406 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 CCT3P49368 545 aaKnown RBP8.56□□□□□ -1.04
DDB1-217ENST00000540166 ARSFP54793 590 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 P2RX3P56373 397 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 TPI1P60174 286 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 LIPEQ05469 1076 aa8.56□□□□□ -1.04
DDB1-217ENST00000540166 AGAP6Q5VW22 663 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms