RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 ANAPC7Q9UJX3 599 aa11.29□□□□□ -0.6
CLSTN3-209ENST00000539982 ACSL5Q9ULC5 683 aa11.29□□□□□ -0.6
CLSTN3-209ENST00000539982 SPO11Q9Y5K1 396 aa11.29□□□□□ -0.6
CLSTN3-209ENST00000539982 COLEC10Q9Y6Z7 277 aa11.29□□□□□ -0.6
CLSTN3-209ENST00000539982 CELSR1Q9NYQ6 3014 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 HIVEP1P15822 2718 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 MGAT4DA6NG13 374 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 MYO1FO00160 1098 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 E2F3O00716 465 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A9O60656 530 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 NDST3O95803 873 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 STSP08842 583 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A6P19224 532 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 HLA-DPA1P20036 260 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A1P22309 533 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A4P22310 534 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 NDUFS1P28331 727 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 PRDX3P30048 256 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 FOLR3P41439 243 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 MYL5Q02045 173 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 SLC14A2Q15849 920 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 FAM182AQ5T1J6 154 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 E4F1Q66K89 784 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 DUS1LQ6P1R4 473 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 B4GALNT4Q76KP1 1039 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 DDHD1Q8NEL9 900 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 SPDYE1Q8NFV5 336 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 GRHL3Q8TE85 626 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 COG1Q8WTW3 980 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 FAR1Q8WVX9 515 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 PTERQ96BW5 349 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 ZNF830Q96NB3 372 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 WDR77Q9BQA1 342 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 THAP2Q9H0W7 228 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A7Q9HAW7 530 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A10Q9HAW8 530 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 UGT1A8Q9HAW9 530 aa11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 GPN3Q9UHW5 284 aaPredicted RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 PTRH2Q9Y3E5 179 aaKnown RBP11.28□□□□□ -0.6
CLSTN3-209ENST00000539982 A0A1W2PQJ5 194 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 KLHL33A6NCF5 533 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 CBSLP0DN79 551 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 SKILP12757 684 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 ST6GAL1P15907 406 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 PBLDP30039 288 aaPredicted RBP11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 CBSP35520 551 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 TSFMP43897 325 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 ART3Q13508 389 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 KRT33BQ14525 404 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 GSE1Q14687 1217 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 PPP2R5EQ16537 467 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 LONRF2Q1L5Z9 754 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 FNBP1LQ5T0N5 605 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 GPRC6AQ5T6X5 926 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 GPR135Q8IZ08 494 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 OR2Y1Q8NGV0 311 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 OR2L2Q8NH16 312 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 DNAJB14Q8TBM8 379 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 PPP4R1Q8TF05 950 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 AGAP3Q96P47 875 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 TRAPPC9Q96Q05 1148 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 CEP41Q9BYV8 373 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 SRMSQ9H3Y6 488 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 TRABDQ9H4I3 376 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 NOVA2Q9UNW9 492 aaKnown RBP11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 CSAG2Q9Y5P2 127 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 AP1M2Q9Y6Q5 423 aa11.27□□□□□ -0.61
CLSTN3-209ENST00000539982 CSMD2Q7Z408 3487 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 GLYATL1P3A0A0U1RQE8 302 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 GSAPA4D1B5 854 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 MASP2O00187 686 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 MT-CYBP00156 380 aaPredicted RBP11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 CYP1A2P05177 515 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 SLC35G4P0C7Q5 338 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 PYGMP11217 842 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 GJC1P36383 396 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 SPAM1P38567 509 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 LMAN1P49257 510 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 DCDP81605 110 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 AP1B1Q10567 949 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 AIMP2Q13155 320 aaKnown RBP11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 ITGA9Q13797 1035 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 HIF1AQ16665 826 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 CYP2A13Q16696 494 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 ZFYVE27Q5T4F4 411 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 IGFL2Q6UWQ7 119 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 FAM151BQ6UXP7 276 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 CDHR3Q6ZTQ4 885 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 PPP1R32Q7Z5V6 425 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 FJX1Q86VR8 437 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 SPATA22Q8NHS9 363 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 LCN9Q8WX39 176 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 RELTQ969Z4 430 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 NACC2Q96BF6 587 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 LURAP1Q96LR2 239 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 RNF157Q96PX1 679 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 CCM2Q9BSQ5 444 aa11.26□□□□□ -0.61
CLSTN3-209ENST00000539982 HSD3B7Q9H2F3 369 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms