RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 CALB2P22676 271 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 TEAD1P28347 426 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 EEF1DP29692 281 aaKnown RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 GSTM4Q03013 218 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 SFSWAPQ12872 951 aaKnown RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 SP140Q13342 867 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 TUBB3Q13509 450 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 TBCCQ15814 346 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 BCL7AQ4VC05 210 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 SH2D4BQ5SQS7 431 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 ANO7Q6IWH7 933 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 METTL2BQ6P1Q9 378 aaKnown RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 ADAMTSL4Q6UY14 1074 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 ALYREFQ86V81 257 aaKnown RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 RASGEF1AQ8N9B8 481 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 ZNF514Q96K75 400 aaPredicted RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 MKRN2Q9H000 416 aaKnown RBP16.57■□□□□ 0.24
COPS3-212ENST00000539941 VCX3BQ9H321 246 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 RNPEPL1Q9HAU8 725 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 VCX3AQ9NNX9 186 aa16.57■□□□□ 0.24
COPS3-212ENST00000539941 SLC16A5O15375 505 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 FFAR2O15552 330 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 GRID2O43424 1007 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 VEGFDO43915 354 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 GPC4O75487 556 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 RNASEH2AO75792 299 aaKnown RBP16.56■□□□□ 0.24
COPS3-212ENST00000539941 PCDH8O95206 1070 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 SIX3O95343 332 aaPredicted RBP16.56■□□□□ 0.24
COPS3-212ENST00000539941 SRFP11831 508 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 VCLP18206 1134 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 MAPK9P45984 424 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 KCNJ2P63252 427 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 LCP2Q13094 533 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 PCBP2Q15366 365 aaKnown RBP eCLIP16.56■□□□□ 0.24
COPS3-212ENST00000539941 EOGTQ5NDL2 527 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 METTL21CQ5VZV1 264 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 TMPRSS6Q8IU80 811 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.56■□□□□ 0.24
COPS3-212ENST00000539941 GJD3Q8N144 294 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 AGR3Q8TD06 166 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 ELMO1Q92556 727 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 ERLEC1Q96DZ1 483 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 CCM2Q9BSQ5 444 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 TRIM39Q9HCM9 518 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 FBXL12Q9NXK8 326 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 MBD1Q9UIS9 605 aaPredicted RBP16.56■□□□□ 0.24
COPS3-212ENST00000539941 INPP4BO15327 924 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 PLRG1O43660 514 aaKnown RBP16.56■□□□□ 0.24
COPS3-212ENST00000539941 HNRNPCL1O60812 293 aaKnown RBP16.56■□□□□ 0.24
COPS3-212ENST00000539941 SLCO2B1O94956 709 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 MLYCDO95822 493 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 ASGR2P07307 311 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 FGF4P08620 206 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 CDKL1Q00532 357 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 CLCQ05315 142 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 HSPA14Q0VDF9 509 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 GTF2H3Q13889 308 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 KRT72Q14CN4 511 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 WASHC2DQ5SRD0 308 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 KIAA1161Q6NSJ0 714 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 TTC23LQ6PF05 361 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 USP30Q70CQ3 517 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 CACUL1Q86Y37 369 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 ENDOVQ8N8Q3 282 aaKnown RBP16.56■□□□□ 0.24
COPS3-212ENST00000539941 GLMNQ92990 594 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 HIC2Q96JB3 615 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 SHCBP1LQ9BZQ2 653 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 NMUR2Q9GZQ4 415 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 TCF7L2Q9NQB0 619 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 SERGEFQ9UGK8 458 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 SCOCQ9UIL1 159 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 PCTPQ9UKL6 214 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 FZD4Q9ULV1 537 aa16.56■□□□□ 0.24
COPS3-212ENST00000539941 IGLON5A6NGN9 336 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 NCF1BA6NI72 391 aaPredicted RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 C19orf67A6NJJ6 358 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 OR2AG2A6NM03 316 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 NCF1CA8MVU1 366 aaPredicted RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 K7ESM1 405 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 CDK14O94921 469 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 UNC5CO95185 931 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 NCF1P14598 390 aaPredicted RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 COL9A1P20849 921 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 CTSCP53634 463 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 RPS21P63220 83 aaKnown RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 TDGQ13569 410 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 CCINQ13939 588 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 BOP1Q14137 746 aaKnown RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 ZNF648Q5T619 568 aaPredicted RBP16.55■□□□□ 0.24
COPS3-212ENST00000539941 SULT1C3Q6IMI6 304 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 PNCKQ6P2M8 343 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 TMEM220Q6QAJ8 160 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 ACAD11Q709F0 780 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 KBTBD6Q86V97 674 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 CLYBLQ8N0X4 340 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 PELI3Q8N2H9 469 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 MAPK15Q8TD08 544 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 UBTD2Q8WUN7 234 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 FAM3CQ92520 227 aa16.55■□□□□ 0.24
COPS3-212ENST00000539941 COX14Q96I36 57 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms