RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 MED27Q6P2C8 311 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 PAOXQ6QHF9 649 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 ZDHHC24Q6UX98 284 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 BEND7Q8N7W2 519 aaPredicted RBP6.83□□□□□ -1.32
SORT1-209ENST00000538502 C4orf32Q8N8J7 132 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 LRRC58Q96CX6 371 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 NXPE2Q96DL1 559 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 ZNF641Q96N77 438 aaPredicted RBP6.83□□□□□ -1.32
SORT1-209ENST00000538502 LGMNQ99538 433 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 TMEM39BQ9GZU3 492 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 TREM1Q9NP99 234 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 TMPRSS4Q9NRS4 437 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 EVA1BQ9NVM1 165 aa6.83□□□□□ -1.32
SORT1-209ENST00000538502 EXOSC1Q9Y3B2 195 aaKnown RBP6.83□□□□□ -1.32
SORT1-209ENST00000538502 M0R233 179 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ARPC2O15144 300 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 SLC7A4O43246 635 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 B4GALT4O60513 344 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 OR7A10O76100 309 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PRAMEF12O95522 483 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GIMD1P0DJR0 217 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TSPAN8P19075 237 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PVALBP20472 110 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 HOXC8P31273 242 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GRM5P41594 1212 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ABL2P42684 1182 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 YAP1P46937 504 aaKnown RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 HERVK_113P63132 956 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GNA12Q03113 381 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 MPP2Q14168 576 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 HEPACAMQ14CZ8 416 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CTC1Q2NKJ3 1217 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 C6orf183Q5T699 404 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 SLC25A25Q6KCM7 469 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FSTL4Q6MZW2 842 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 IRF2BP1Q8IU81 584 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PHC2Q8IXK0 858 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GEMIN6Q8WXD5 167 aaKnown RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 TNFRSF25Q93038 417 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 GATA5Q9BWX5 397 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 ERVK-6Q9BXR3 956 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ZNF350Q9GZX5 532 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 KCNIP3Q9Y2W7 256 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 HSPE1-MOB4S4R3N1 261 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PIK3C2BO00750 1634 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FAM149AA5PLN7 773 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TGFB1I1O43294 461 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ARL6IP5O75915 188 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ENDOD1O94919 500 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 LRATO95237 230 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 AGR2O95994 175 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 IFNA21P01568 189 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 HLA-DPB1P04440 258 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FSHRP23945 695 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 MAGEA12P43365 314 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CDH12P55289 794 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PRR5P85299 388 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 BTBD16Q32M84 506 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FAM91A1Q658Y4 838 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 EPGNQ6UW88 154 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ZNF433Q8N7K0 673 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 LSM14AQ8ND56 463 aaKnown RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 GPR156Q8NFN8 814 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ADAM32Q8TC27 787 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TMEM168Q9H0V1 697 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ZDHHC6Q9H6R6 413 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TRPV4Q9HBA0 871 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 SPATA7Q9P0W8 599 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CNTN3Q9P232 1028 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 RNF6Q9Y252 685 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 NR2E1Q9Y466 385 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 TECPR2O15040 1411 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 C1QTNF3-AMACRE9PGA6 284 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FBP2O00757 339 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PLD2O14939 933 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 PIP5K1BO14986 540 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 INMTO95050 263 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FGF19O95750 216 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CSTF2P33240 577 aaKnown RBP eCLIP6.82□□□□□ -1.32
SORT1-209ENST00000538502 MSX2P35548 267 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 NDST2P52849 883 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 AP2S1P53680 142 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 CASP7P55210 303 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FGL1Q08830 312 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 SLC39A12Q504Y0 691 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 KIAA0930Q6ICG6 404 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 SCIMPQ6UWF3 145 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 UBQLNLQ8IYU4 475 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 OR10G2Q8NGC3 310 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 ACER1Q8TDN7 264 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 MRIQ9BWK5 157 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 CIPCQ9C0C6 399 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 DEFB129Q9H1M3 183 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 SLC25A51Q9H1U9 297 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.82□□□□□ -1.32
SORT1-209ENST00000538502 ATF5Q9Y2D1 282 aaPredicted RBP6.82□□□□□ -1.32
SORT1-209ENST00000538502 TLR4O00206 839 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 FAM155BO75949 473 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 NDST3O95803 873 aa6.82□□□□□ -1.32
SORT1-209ENST00000538502 BDNFP23560 247 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms