RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 LRRC3Q9BY71 257 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 ANAPC2Q9UJX6 822 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 CROCCQ5TZA2 2017 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 ANKRD28O15084 1053 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 SOCS5O75159 536 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 SERPINA4P29622 427 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 CLCN2P51788 898 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 HMGCS1Q01581 520 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 NXPE1Q8N323 547 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 OR2AP1Q8NGE2 309 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 ISG20Q96AZ6 181 aaKnown RBP24.46■■□□□ 1.51
RAB40C-204ENST00000538492 RHBDF1Q96CC6 855 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 ZNF689Q96CS4 500 aaPredicted RBP24.46■■□□□ 1.51
RAB40C-204ENST00000538492 CD244Q9BZW8 370 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 RNF208Q9H0X6 261 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 MUC13Q9H3R2 512 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 PAK6Q9NQU5 681 aaPredicted RBP24.46■■□□□ 1.51
RAB40C-204ENST00000538492 PNPLA3Q9NST1 481 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 ABCB8Q9NUT2 735 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 KIAA1522Q9P206 1035 aaPredicted RBP24.46■■□□□ 1.51
RAB40C-204ENST00000538492 KLQ9UEF7 1012 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 MYRFQ9Y2G1 1151 aa24.46■■□□□ 1.51
RAB40C-204ENST00000538492 PARNO95453 639 aaKnown RBP24.45■■□□□ 1.5
RAB40C-204ENST00000538492 NR1H2P55055 460 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 DDX53Q86TM3 631 aaKnown RBP24.45■■□□□ 1.5
RAB40C-204ENST00000538492 BIRC7Q96CA5 298 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 VCX3AQ9NNX9 186 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 MAPK8P45983 427 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 LRRC73Q5JTD7 316 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 CRTC1Q6UUV9 634 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 RFLNAQ6ZTI6 216 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 CMTM8Q8IZV2 173 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 DPP10Q8N608 796 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 RMND5BQ96G75 393 aaPredicted RBP24.45■■□□□ 1.5
RAB40C-204ENST00000538492 HTATIP2Q9BUP3 242 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 C9orf16Q9BUW7 83 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 RBM38Q9H0Z9 239 aaKnown RBP24.45■■□□□ 1.5
RAB40C-204ENST00000538492 ZFP14Q9HCL3 533 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 CCL27Q9Y4X3 112 aa24.45■■□□□ 1.5
RAB40C-204ENST00000538492 ZNF106Q9H2Y7 1883 aaKnown RBP24.44■■□□□ 1.5
RAB40C-204ENST00000538492 DOCK6Q96HP0 2047 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 A0A1W2PRU2 124 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 H3BNH8 94 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 ARHGEF7Q14155 803 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 AASDHQ4L235 1098 aaPredicted RBP24.44■■□□□ 1.5
RAB40C-204ENST00000538492 MPPE1Q53F39 396 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 LRRC66Q68CR7 880 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 GRAMD4Q6IC98 578 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 MACC1Q6ZN28 852 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 HTR3DQ70Z44 454 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 TRIML2Q8N7C3 387 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 ASIC4Q96FT7 647 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 HTR1EP28566 365 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 RFC2P35250 354 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 LSAMPQ13449 338 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 ATP6AP1Q15904 470 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 PACRGLQ8N7B6 248 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 PADI4Q9UM07 663 aa24.44■■□□□ 1.5
RAB40C-204ENST00000538492 EI24O14681 340 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 ACOX3O15254 700 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 TGM5O43548 720 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 NPPAP01160 153 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 SRCP12931 536 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 GLYATQ6IB77 296 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 SULT1C3Q6IMI6 304 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 MFSD2AQ8NA29 543 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 FIBINQ8TAL6 211 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 SH3GL3Q99963 347 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 ADI1Q9BV57 179 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 VARSP26640 1264 aaKnown RBP24.43■■□□□ 1.5
RAB40C-204ENST00000538492 CSNK1DP48730 415 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 GPR33Q49SQ1 333 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 LYPLAL1Q5VWZ2 237 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 VOPP1Q96AW1 172 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 MTFMTQ96DP5 389 aaKnown RBP24.43■■□□□ 1.5
RAB40C-204ENST00000538492 MPP4Q96JB8 637 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 PPP3R2Q96LZ3 170 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 RNF145Q96MT1 663 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 CGREF1Q99674 301 aa24.43■■□□□ 1.5
RAB40C-204ENST00000538492 LOC730098B7Z3J9 87 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 CLIC3O95833 236 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 FCGR1AP12314 374 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 CDH15P55291 814 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 MERTKQ12866 999 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 ARHGEF6Q15052 776 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 PYCR3Q53H96 274 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 TMEM45AQ9NWC5 275 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 ZNHIT2Q9UHR6 403 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 ZNF490Q9ULM2 529 aaPredicted RBP24.42■■□□□ 1.5
RAB40C-204ENST00000538492 DENND4CQ5VZ89 1909 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 DYTNA2CJ06 578 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 H3BSA7 217 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 K7EPI3 171 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 RGS14O43566 566 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 ULK1O75385 1050 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 JAK1P23458 1154 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 ATP13A5Q4VNC0 1218 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 CYGBQ8WWM9 190 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 HAUS8Q9BT25 410 aa24.42■■□□□ 1.5
RAB40C-204ENST00000538492 OGDHLQ9ULD0 1010 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms