RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 MFN2O95140 757 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 WNT11O96014 354 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ANXA6P08133 673 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SUPT20HL2P0C7V6 817 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 IL7P13232 177 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PAMP19021 973 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SPINK2P20155 84 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 NR4A1P22736 598 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 HLA-DMAP28067 261 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SOX6P35712 828 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 HNF4AP41235 474 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 GRIA1P42261 906 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PPP3CCP48454 512 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CLK3P49761 638 aaKnown RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 CLCNKBP51801 687 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ATXN3P54252 364 aaPredicted RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 CLCQ05315 142 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 LIPEQ05469 1076 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CD47Q08722 323 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 INCA1Q0VD86 236 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SPP2Q13103 211 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TNK1Q13470 666 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 GPR50Q13585 617 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PRPSAP1Q14558 356 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CLCA4Q14CN2 919 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PLCL1Q15111 1095 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ANGPT1Q15389 498 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 UGCGQ16739 394 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 DPY19L1Q2PZI1 675 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TIMM50Q3ZCQ8 353 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SPANXN2Q5MJ10 180 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TPRG1LQ5T0D9 272 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 KCTD11Q693B1 232 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 NEK5Q6P3R8 708 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ZNF765Q7L2R6 523 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PIWIL3Q7Z3Z3 882 aaKnown RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 PTAR1Q7Z6K3 402 aaPredicted RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 CUZD1Q86UP6 607 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 DTX1Q86Y01 620 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 KRTAP1-3Q8IUG1 177 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 HID1Q8IV36 788 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SP8Q8IXZ3 490 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CENPLQ8N0S6 344 aaPredicted RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 METTL4Q8N3J2 472 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CCNYL1Q8N7R7 359 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TXNDC5Q8NBS9 432 aaKnown RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 ZFAND1Q8TCF1 268 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PEX13Q92968 403 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TMBIM1Q969X1 311 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CPB2Q96IY4 423 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ST6GAL2Q96JF0 529 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 FCRL3Q96P31 734 aaPredicted RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 CSPG4P5Q96PW8 444 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SLC39A3Q9BRY0 314 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 C11orf84Q9BUA3 381 aaPredicted RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 MRPL4Q9BYD3 311 aaKnown RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 NUAK2Q9H093 628 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 RACGAP1Q9H0H5 632 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 C2orf40Q9H1Z8 148 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 DCSTAMPQ9H295 470 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TMEM245Q9H330 911 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 TOR3AQ9H497 397 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 POMKQ9H5K3 350 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ZNF556Q9HAH1 456 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 NTN4Q9HB63 628 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ZFP14Q9HCL3 533 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ABCB10Q9NRK6 738 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 C1GALT1Q9NS00 363 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PLCXD1Q9NUJ7 323 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 DDX28Q9NUL7 540 aaKnown RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 PTTG3PQ9NZH4 202 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 ZIM2Q9NZV7 527 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 XPR1Q9UBH6 696 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PCOLCE2Q9UKZ9 415 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SLC39A10Q9ULF5 831 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 MAGED2Q9UNF1 606 aaPredicted RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 RABL2BQ9UNT1 228 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PCDHGB6Q9Y5F9 930 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 PCDHGA8Q9Y5G5 932 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 LYVE1Q9Y5Y7 322 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 CSNK1G3Q9Y6M4 447 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 AP1M2Q9Y6Q5 423 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 DGKBQ9Y6T7 804 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 SBF1O95248 1867 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 BRCA1P38398 1863 aaKnown RBP6.6□□□□□ -1.35
USP28-207ENST00000538475 BTAF1O14981 1849 aa6.6□□□□□ -1.35
USP28-207ENST00000538475 EVPLQ92817 2033 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 CLRN2A0PK11 232 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 FAM92AA1XBS5 289 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 FAM149AA5PLN7 773 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 EFCAB9A8MZ26 197 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 M0QYV0 167 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 DDX39AO00148 427 aaKnown RBP6.59□□□□□ -1.35
USP28-207ENST00000538475 CCRL2O00421 344 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 PLK4O00444 970 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 ACKR2O00590 384 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 NRP1O14786 923 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 SEC14L5O43304 696 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 INMTO95050 263 aa6.59□□□□□ -1.35
USP28-207ENST00000538475 SCELO95171 688 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms