RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 DLG3Q92796 817 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ZNF669Q96BR6 464 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NXPE2Q96DL1 559 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 EXOC2Q96KP1 924 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CNDP2Q96KP4 475 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SLC38A3Q99624 504 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CGREF1Q99674 301 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 WRAP53Q9BUR4 548 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 LGR4Q9BXB1 951 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ROPN1BQ9BZX4 212 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TPK1Q9H3S4 243 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ROPN1Q9HAT0 212 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 FBRSL1Q9HCM7 1045 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CUEDC1Q9NWM3 386 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NMRK1Q9NWW6 199 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ADGRE2Q9UHX3 823 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SLC24A2Q9UI40 661 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CLEC4EQ9ULY5 219 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GPSM3Q9Y4H4 160 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 R4GN57 208 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GREB1Q4ZG55 1949 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 A0A087X1B8 175 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 A0A1B0GVT2 93 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 A0A1W2PR77 199 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PRSS38A1L453 326 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 A6NHS1 94 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 K7ERQ8 282 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CD3EAPO15446 510 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ZBTB14O43829 449 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PIAS2O75928 621 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SEC31AO94979 1220 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PAK4O96013 591 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PDGFBP01127 241 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 RBP1P09455 135 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GSTT2P0CG29 244 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GSTT2BP0CG30 244 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ATP1B2P14415 290 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 PKMP14618 531 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 VAV1P15498 845 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 AMD1P17707 334 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 VARSP26640 1264 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 RBMS1P29558 406 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GP5P40197 560 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ID4P47928 161 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SESN2P58004 480 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MAXP61244 160 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 POU4F1Q01851 419 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MEF2AQ02078 507 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TCF15Q12870 199 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 GAS6Q14393 721 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 KCNJ11Q14654 390 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 WSCD2Q2TBF2 565 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ANKDD1AQ495B1 522 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 C14orf28Q4W4Y0 310 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 HENMT1Q5T8I9 393 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DENND2CQ68D51 928 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TXNRD3NBQ6F5E7 133 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NAXDQ8IW45 347 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CNTD1Q8N815 330 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NAT8LQ8N9F0 302 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ZSCAN1Q8NBB4 408 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 OR4K2Q8NGD2 314 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 LZICQ8WZA0 190 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 REPS1Q96D71 796 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SCARF2Q96GP6 870 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CDKN2AIPNLQ96HQ2 116 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 COG8Q96MW5 612 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ROGDIQ9GZN7 287 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CD93Q9NPY3 652 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 C20orf96Q9NUD7 363 aaPredicted RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DDX18Q9NVP1 670 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 FAM8A1Q9UBU6 413 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 ZNHIT2Q9UHR6 403 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 SLC39A10Q9ULF5 831 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 CDC14AQ9UNH5 594 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 NOVA2Q9UNW9 492 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MAPRE3Q9UPY8 281 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 TNPO3Q9Y5L0 923 aaKnown RBP3.52□□□□□ -1.85
PTPN22-211ENST00000538253 DUSP10Q9Y6W6 482 aa3.52□□□□□ -1.85
PTPN22-211ENST00000538253 MIA3Q5JRA6 1907 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 GOLGA8MH3BSY2 632 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 NUDT21O43809 227 aaKnown RBP3.51□□□□□ -1.85
PTPN22-211ENST00000538253 AGR2O95994 175 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 MPOP05164 745 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 CYC1P08574 325 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 BRAFP15056 766 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 EPB42P16452 691 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 CTPS1P17812 591 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 GLDCP23378 1020 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 ALDH3A1P30838 453 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 ACTR1BP42025 376 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 MSH2P43246 934 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 MARCKSL1P49006 195 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 IRAK1P51617 712 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 ACTR1AP61163 376 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 SLC10A2Q12908 348 aaPredicted RBP3.51□□□□□ -1.85
PTPN22-211ENST00000538253 PDIA2Q13087 525 aaKnown RBP3.51□□□□□ -1.85
PTPN22-211ENST00000538253 NFATC2Q13469 925 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 SQSTM1Q13501 440 aa3.51□□□□□ -1.85
PTPN22-211ENST00000538253 SPIDRQ14159 915 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms