RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 TMEM198Q66K66 360 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 ZNF343Q6P1L6 599 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 GPRIN3Q6ZVF9 776 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 RSRC2Q7L4I2 434 aaKnown RBP3.82□□□□□ -1.8
VBP1-203ENST00000535916 HIST3H2AQ7L7L0 130 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 ZNF554Q86TJ5 538 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 HJURPQ8NCD3 748 aaPredicted RBP3.82□□□□□ -1.8
VBP1-203ENST00000535916 OR4C3Q8NH37 302 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 DAZLQ92904 295 aaKnown RBP3.82□□□□□ -1.8
VBP1-203ENST00000535916 NSL1Q96IY1 281 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 TRAF4Q9BUZ4 470 aaPredicted RBP3.82□□□□□ -1.8
VBP1-203ENST00000535916 LRRC61Q9BV99 259 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 ACKR4Q9NPB9 350 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 ERAP1Q9NZ08 941 aa3.82□□□□□ -1.8
VBP1-203ENST00000535916 FAM237BA0A1B0GVD1 139 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 MEX3AA1L020 520 aaKnown RBP3.81□□□□□ -1.8
VBP1-203ENST00000535916 A8MU10 97 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 ZSCAN5DPP0CG00 497 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 UGT1A4P22310 534 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 GOLGA8DPQ0D2H9 430 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 NIPAL4Q0D2K0 466 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 COX10Q12887 443 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 GAGE2BQ13066 116 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 NECTIN1Q15223 517 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 GAGE2EQ4V326 116 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 GAGE2AQ6NT46 116 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 R3HCC1LQ7Z5L2 792 aaKnown RBP3.81□□□□□ -1.8
VBP1-203ENST00000535916 PIGZQ86VD9 579 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 Q8N377 158 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 EVI5LQ96CN4 794 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 RRP7BPQ9NSQ0 103 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 GAGE2DQ9UEU5 116 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 CROCCQ5TZA2 2017 aa3.81□□□□□ -1.8
VBP1-203ENST00000535916 CREB3O43889 395 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 GPIP06744 558 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 TAF1BQ53T94 588 aaPredicted RBP3.8□□□□□ -1.8
VBP1-203ENST00000535916 ADALQ6DHV7 355 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 GLDNQ6ZMI3 551 aaPredicted RBP3.8□□□□□ -1.8
VBP1-203ENST00000535916 ARHGAP12Q8IWW6 846 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 HACE1Q8IYU2 909 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 LSMEM2Q8N112 164 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 NSMCE3Q96MG7 304 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 NUDCD1Q96RS6 583 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 SLC22A12Q96S37 553 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 FUCA2Q9BTY2 467 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 HGH1Q9BTY7 390 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 UPF3AQ9H1J1 476 aaKnown RBP3.8□□□□□ -1.8
VBP1-203ENST00000535916 LUZP4Q9P127 313 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 EPHA6Q9UF33 1036 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 RIPK3Q9Y572 518 aa3.8□□□□□ -1.8
VBP1-203ENST00000535916 LRRFIP2Q9Y608 721 aaKnown RBP3.8□□□□□ -1.8
VBP1-203ENST00000535916 SPIN1Q9Y657 262 aaPredicted RBP3.8□□□□□ -1.8
VBP1-203ENST00000535916 A0A1W2PPH5 198 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 A0A1W2PRB8 838 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 EFNA1P20827 205 aaPredicted RBP3.79□□□□□ -1.8
VBP1-203ENST00000535916 BSGP35613 385 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 MS4A2Q01362 244 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 PEX6Q13608 980 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 E2F5Q15329 346 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 GCNT6Q5T4J0 391 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 ACSM2BQ68CK6 577 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 FAM109BQ6ICB4 259 aaPredicted RBP3.79□□□□□ -1.8
VBP1-203ENST00000535916 FRMD1Q8N878 549 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 OR2L2Q8NH16 312 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 KCNG4Q8TDN1 519 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 DYRK2Q92630 601 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 SETD4Q9NVD3 440 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 KCNE2Q9Y6J6 123 aa3.79□□□□□ -1.8
VBP1-203ENST00000535916 SOS1Q07889 1333 aaPredicted RBP3.78□□□□□ -1.8
VBP1-203ENST00000535916 MSGN1A6NI15 193 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 KLF11O14901 512 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 PIGNO95427 931 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 PPP2R2BQ00005 443 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 LACC1Q8IV20 430 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 ABCA7Q8IZY2 2146 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 TSPYL6Q8N831 410 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 OR5AP2Q8NGF4 316 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 C1orf74Q96LT6 269 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 SGK494Q96LW2 274 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 GAD1Q99259 594 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 DDOQ99489 341 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 SOSTQ9BQB4 213 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 ABHD6Q9BV23 337 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 WDR37Q9Y2I8 494 aa3.78□□□□□ -1.8
VBP1-203ENST00000535916 MYH15Q9Y2K3 1946 aa3.78□□□□□ -1.81
VBP1-203ENST00000535916 LOC101059948A0A1B0GTJ6 334 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 MED19A0JLT2 244 aaPredicted RBP3.77□□□□□ -1.81
VBP1-203ENST00000535916 A6NLC8 198 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 KPNA7A9QM74 516 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 EPM2AB3EWF7 344 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 ZNF195O14628 629 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 NXPH2O95156 264 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 HLA-BQ31612 363 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 Q6ZRP5 223 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 GALNT5Q7Z7M9 940 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 DIS3L2Q8IYB7 885 aaKnown RBP3.77□□□□□ -1.81
VBP1-203ENST00000535916 CPSF7Q8N684 471 aaKnown RBP3.77□□□□□ -1.81
VBP1-203ENST00000535916 ETNPPLQ8TBG4 499 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 ELMOD3Q96FG2 381 aa3.77□□□□□ -1.81
VBP1-203ENST00000535916 RAB11FIP5Q9BXF6 653 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms