RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 FTCDO95954 541 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 CYC1P08574 325 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 ADORA1P30542 326 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 KRT20P35900 424 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 USP8P40818 1118 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 CTCFP49711 727 aaPredicted RBP3.41□□□□□ -1.86
USP48-215ENST00000534705 GNAQP50148 359 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 HNRNPH2P55795 449 aaKnown RBP3.41□□□□□ -1.86
USP48-215ENST00000534705 CBX1P83916 185 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 NAE1Q13564 534 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 FGFBP1Q14512 234 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 FAM76BQ5HYJ3 339 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 PAPPA-AS1Q5QFB9 102 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 C20orf194Q5TEA3 1177 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 FRG2Q64ET8 278 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 PQLC2Q6ZP29 291 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 RPAINQ86UA6 219 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 HEATR4Q86WZ0 1026 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 SPATA6LQ8N4H0 392 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 CHCHD4Q8N4Q1 142 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 PIBF1Q8WXW3 757 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 FIG4Q92562 907 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 PABPC5Q96DU9 382 aaKnown RBP3.41□□□□□ -1.86
USP48-215ENST00000534705 TMEM19Q96HH6 336 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 CSF3RQ99062 836 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 MYCBPQ99417 103 aaPredicted RBP3.41□□□□□ -1.86
USP48-215ENST00000534705 SIL1Q9H173 461 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 KCNN2Q9H2S1 579 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 PPP1R3EQ9H7J1 279 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 PREBQ9HCU5 417 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 LTB4R2Q9NPC1 389 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 MYOZ2Q9NPC6 264 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 MED4Q9NPJ6 270 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 KLHL1Q9NR64 748 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 A0A0G2JMZ2 1700 aa3.41□□□□□ -1.86
USP48-215ENST00000534705 BRCA2P51587 3418 aa3.4□□□□□ -1.86
USP48-215ENST00000534705 HNRNPCL2B2RXH8 293 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 B4DLN1 442 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 PRAC2D3DTV9 90 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 ZNF587BE7ETH6 402 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 BMPR1BO00238 502 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 SOCS5O75159 536 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 TMEM63AO94886 807 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 AFPP02771 609 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 CCDC172P0C7W6 258 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 DGKAP23743 735 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 CTNNA1P35221 906 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 IL15P40933 162 aaPredicted RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 EIF2S3P41091 472 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 TUBP50607 506 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 TIMM10P62072 90 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 RPL7AP62424 266 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 TFCP2Q12800 502 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 ZBTB17Q13105 803 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 OLIG2Q13516 323 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 MVPQ14764 893 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 C2orf68Q2NKX9 166 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 ALG11Q2TAA5 492 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 SLC45A4Q5BKX6 768 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 MFSD4BQ5TF39 518 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 TRNP1Q6NT89 227 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 CDC73Q6P1J9 531 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 WDR73Q6P4I2 378 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 FBXO46Q6PJ61 603 aaPredicted RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 FOXL2NBQ6ZUU3 175 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 CACNA2D4Q7Z3S7 1137 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 GALNT5Q7Z7M9 940 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 SFR1Q86XK3 245 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 LSMEM1Q8N8F7 131 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 ZNF441Q8N8Z8 693 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 IQUBQ8NA54 791 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 POC1AQ8NBT0 407 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 ATP6V1E2Q96A05 226 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 FAM149B1Q96BN6 582 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 CDCA5Q96FF9 252 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 RSRC1Q96IZ7 334 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 FEM1CQ96JP0 617 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 PRMT6Q96LA8 375 aaPredicted RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 BARD1Q99728 777 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 TMEM47Q9BQJ4 181 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 UBXN6Q9BZV1 441 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 CCDC68Q9H2F9 335 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 GPR108Q9NPR9 543 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 SLC6A13Q9NSD5 602 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 OLA1Q9NTK5 396 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 ABI3Q9P2A4 366 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 HAO1Q9UJM8 370 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 INTS6Q9UL03 887 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 TTC7AQ9ULT0 858 aaPredicted RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 AMDHD2Q9Y303 409 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 KIAA0100Q14667 2235 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 PDS5AQ29RF7 1337 aaKnown RBP3.4□□□□□ -1.87
USP48-215ENST00000534705 SALL1Q9NSC2 1324 aa3.4□□□□□ -1.87
USP48-215ENST00000534705 RPAP1Q9BWH6 1393 aaPredicted RBP3.39□□□□□ -1.87
USP48-215ENST00000534705 MYH7BA7E2Y1 1941 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 KIAA1217Q5T5P2 1943 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 A0A087X0M5 115 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 A0A1B0GUL7 405 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 A0A1B0GX30 115 aa3.39□□□□□ -1.87
USP48-215ENST00000534705 CELF2O95319 508 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms