RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 RSC1A1Q92681 617 aa20.83■□□□□ 0.93
PKP3-211ENST00000534401 C9orf72Q96LT7 481 aa20.83■□□□□ 0.93
PKP3-211ENST00000534401 TWSG1Q9GZX9 223 aa20.83■□□□□ 0.93
PKP3-211ENST00000534401 IMP3Q9NV31 184 aaKnown RBP20.83■□□□□ 0.93
PKP3-211ENST00000534401 AKAP7Q9P0M2 348 aaPredicted RBP20.83■□□□□ 0.93
PKP3-211ENST00000534401 CDYLQ9Y232 598 aa20.83■□□□□ 0.93
PKP3-211ENST00000534401 COLEC10Q9Y6Z7 277 aa20.83■□□□□ 0.93
PKP3-211ENST00000534401 GOLGA8MH3BSY2 632 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 JMJD7P0C870 316 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 TYRP1P17643 537 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 MPSTP25325 297 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 SLC5A2P31639 672 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 CCR7P32248 378 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 GFERP55789 205 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 DR1Q01658 176 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 DHX34Q14147 1143 aaKnown RBP20.82■□□□□ 0.92
PKP3-211ENST00000534401 DUS1LQ6P1R4 473 aaKnown RBP20.82■□□□□ 0.92
PKP3-211ENST00000534401 PRSS42Q7Z5A4 293 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 KLHL7Q8IXQ5 586 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 ZNF248Q8NDW4 579 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 BIRC8Q96P09 236 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 TRIM56Q9BRZ2 755 aaKnown RBP20.82■□□□□ 0.92
PKP3-211ENST00000534401 MVB12BQ9H7P6 319 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 FAM8A1Q9UBU6 413 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 PISDQ9UG56 409 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 ASIC3Q9UHC3 531 aa20.82■□□□□ 0.92
PKP3-211ENST00000534401 C9orf172C9J069 976 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 SMAPO00193 183 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 CAPN5O15484 640 aaPredicted RBP20.81■□□□□ 0.92
PKP3-211ENST00000534401 USP1O94782 785 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 AMD1P17707 334 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 OGNP20774 298 aaKnown RBP20.81■□□□□ 0.92
PKP3-211ENST00000534401 PREPP48147 710 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 MORF4L2Q15014 288 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 MRNIPQ6NTE8 343 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 NEPROQ6NW34 567 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 ZNF449Q6P9G9 518 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 LKAAEAR1Q8TD35 194 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 KLHL6Q8WZ60 621 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 LPGAT1Q92604 370 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 DPH1Q9BZG8 443 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 TFB2MQ9H5Q4 396 aaKnown RBP20.81■□□□□ 0.92
PKP3-211ENST00000534401 SIDT1Q9NXL6 827 aaKnown RBP20.81■□□□□ 0.92
PKP3-211ENST00000534401 SAMD15Q9P1V8 674 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 FAM169AQ9Y6X4 670 aa20.81■□□□□ 0.92
PKP3-211ENST00000534401 SDK2Q58EX2 2172 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 IQCJ-SCHIP1C9J366 451 aaPredicted RBP20.8■□□□□ 0.92
PKP3-211ENST00000534401 SLCO2B1O94956 709 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 PAMP19021 973 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 AOAHP28039 575 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 CASQ1P31415 396 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 CSTF2P33240 577 aaKnown RBP eCLIP20.8■□□□□ 0.92
PKP3-211ENST00000534401 MAPK9P45984 424 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 MC2RQ01718 297 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 IZUMO3Q5VZ72 239 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 HIBCHQ6NVY1 386 aaPredicted RBP20.8■□□□□ 0.92
PKP3-211ENST00000534401 KLHL35Q6PF15 583 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 FOXR1Q6PIV2 292 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 SYT10Q6XYQ8 523 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 CENPUQ71F23 418 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 ZNF572Q7Z3I7 529 aaPredicted RBP20.8■□□□□ 0.92
PKP3-211ENST00000534401 SDCCAG8Q86SQ7 713 aaPredicted RBP20.8■□□□□ 0.92
PKP3-211ENST00000534401 CILP2Q8IUL8 1156 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 SLC22A15Q8IZD6 547 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 ACVR1CQ8NER5 493 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 SPATA4Q8NEY3 305 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 ELMO1Q92556 727 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 TFGQ92734 400 aaPredicted RBP20.8■□□□□ 0.92
PKP3-211ENST00000534401 USP7Q93009 1102 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 TAAR9Q96RI9 348 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 DDA1Q9BW61 102 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 SPRY4Q9C004 299 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 FBXO8Q9NRD0 319 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 LATS2Q9NRM7 1088 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 OCIAD1Q9NX40 245 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 RALYQ9UKM9 306 aaKnown RBP20.8■□□□□ 0.92
PKP3-211ENST00000534401 RPS6KL1Q9Y6S9 549 aa20.8■□□□□ 0.92
PKP3-211ENST00000534401 ZFYVE26Q68DK2 2539 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 OR5K3A6NET4 321 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 IFRD1O00458 451 aaPredicted RBP20.79■□□□□ 0.92
PKP3-211ENST00000534401 TTI1O43156 1089 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 NDUFS3O75489 264 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 S1PR4O95977 384 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 LEPRP48357 1165 aaKnown RBP20.79■□□□□ 0.92
PKP3-211ENST00000534401 MSS51Q4VC12 460 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 RNF187Q5TA31 235 aaPredicted RBP20.79■□□□□ 0.92
PKP3-211ENST00000534401 CASC4Q6P4E1 433 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 LMNTD2Q8IXW0 634 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 ZNF669Q96BR6 464 aaPredicted RBP20.79■□□□□ 0.92
PKP3-211ENST00000534401 ZDHHC12Q96GR4 267 aa20.79■□□□□ 0.92
PKP3-211ENST00000534401 ZNF768Q9H5H4 540 aaKnown RBP20.79■□□□□ 0.92
PKP3-211ENST00000534401 FAM208BQ5VWN6 2430 aa20.78■□□□□ 0.92
PKP3-211ENST00000534401 GOLGA8KD6RF30 607 aa20.78■□□□□ 0.92
PKP3-211ENST00000534401 GOLGA8TH3BQL2 631 aa20.78■□□□□ 0.92
PKP3-211ENST00000534401 RRP8O43159 456 aaKnown RBP20.78■□□□□ 0.92
PKP3-211ENST00000534401 PRAMEF10O60809 474 aa20.78■□□□□ 0.92
PKP3-211ENST00000534401 SEC31AO94979 1220 aaKnown RBP20.78■□□□□ 0.92
PKP3-211ENST00000534401 CD82P27701 267 aa20.78■□□□□ 0.92
PKP3-211ENST00000534401 GBX1Q14549 363 aa20.78■□□□□ 0.92
PKP3-211ENST00000534401 CTSL3PQ5NE16 218 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms