RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 ZNF71Q9NQZ8 489 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 KCND1Q9NSA2 647 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 NLE1Q9NVX2 485 aaPredicted RBP8.69□□□□□ -1.02
COPB1-211ENST00000534234 ZDHHC3Q9NYG2 299 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 HEBP2Q9Y5Z4 205 aa8.69□□□□□ -1.02
COPB1-211ENST00000534234 SDK2Q58EX2 2172 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 A0A0U1RQJ8 604 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 PIPSLA2A3N6 862 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 DDX3YO15523 660 aaKnown RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 PSMD3O43242 534 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 ZBTB11O95625 1053 aaPredicted RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 POLR2CP19387 275 aaPredicted RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 ARCN1P48444 511 aaKnown RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 GDF10P55107 478 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 PRKAA1Q13131 559 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 KLF1Q13351 362 aaPredicted RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 DNASE1L3Q13609 305 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 SEPT6Q14141 434 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 POU6F1Q14863 301 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 P3H1Q32P28 736 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 TMTC4Q5T4D3 741 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 ZNF449Q6P9G9 518 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 FAM199XQ6PEV8 388 aaPredicted RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 FBXO38Q6PIJ6 1188 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 TMEM139Q8IV31 216 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 D2HGDHQ8N465 521 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 TAB3Q8N5C8 712 aaPredicted RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 CLDN19Q8N6F1 224 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 PHC3Q8NDX5 983 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 ACVR1CQ8NER5 493 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 C9orf43Q8TAL5 461 aaPredicted RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 SLC35B2Q8TB61 432 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 LCN9Q8WX39 176 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 CDKN2AIPNLQ96HQ2 116 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 PPM1MQ96MI6 270 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 ALS2CR12Q96Q35 445 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 FERD3LQ96RJ6 166 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 DESI2Q9BSY9 194 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 TMEM121Q9BTD3 319 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 SRMSQ9H3Y6 488 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 PIH1D1Q9NWS0 290 aaKnown RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 R3HDM2Q9Y2K5 976 aaKnown RBP8.68□□□□□ -1.02
COPB1-211ENST00000534234 PCDHGA6Q9Y5G7 932 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 KCNMB2Q9Y691 235 aa8.68□□□□□ -1.02
COPB1-211ENST00000534234 COL6A6A6NMZ7 2263 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 IGLV3-16A0A075B6K0 115 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 TRBV5-4A0A0C4DH59 114 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 TCRBV7S2A1N4TA0A589 114 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 H7C0S8 307 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 IFRD1O00458 451 aaPredicted RBP8.67□□□□□ -1.02
COPB1-211ENST00000534234 CREG1O75629 220 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 AP2A1O95782 977 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 RECKO95980 971 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 FURINP09958 794 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 PRSS56P0CW18 603 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 CDH3P22223 829 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 ACRV1P26436 265 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 PDHA2P29803 388 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 STIP1P31948 543 aaKnown RBP8.67□□□□□ -1.02
COPB1-211ENST00000534234 CD151P48509 253 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 KPNA2P52292 529 aaKnown RBP8.67□□□□□ -1.02
COPB1-211ENST00000534234 TUBB4BP68371 445 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 TLE1Q04724 770 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 CACNG1Q06432 222 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 TUBB2AQ13885 445 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 GPR19Q15760 415 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 SKIDA1Q1XH10 827 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 MICALCLQ6ZW33 695 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 PIANPQ8IYJ0 282 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 CARFQ8N187 725 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 CT55Q8WUE5 264 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 STYXQ8WUJ0 223 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 HES6Q96HZ4 224 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 TUBB2BQ9BVA1 445 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 GPR87Q9BY21 358 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 TWSG1Q9GZX9 223 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 OR52A5Q9H2C5 316 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 COG4Q9H9E3 785 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 VPS37BQ9H9H4 285 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 SOHLH2Q9NX45 425 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 SMARCAL1Q9NZC9 954 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 POLHQ9Y253 713 aa8.67□□□□□ -1.02
COPB1-211ENST00000534234 FLNBO75369 2602 aaKnown RBP8.66□□□□□ -1.02
COPB1-211ENST00000534234 CCDC78A2IDD5 438 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 GSAPA4D1B5 854 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 CDC14CA4D256 554 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 SLC9B1P1A6NJY1 282 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 C21orf140B9A014 251 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 MATN2O00339 956 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 BTN3A3O00478 584 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 CPNE3O75131 537 aaKnown RBP8.66□□□□□ -1.02
COPB1-211ENST00000534234 SCRG1O75711 98 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 PRDX3P30048 256 aaKnown RBP8.66□□□□□ -1.02
COPB1-211ENST00000534234 RPA4Q13156 261 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 PRKG2Q13237 762 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 DBN1Q16643 649 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 ZNF658BQ4V348 819 aaPredicted RBP8.66□□□□□ -1.02
COPB1-211ENST00000534234 LINC00523Q86TU6 105 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 TMEM135Q86UB9 458 aa8.66□□□□□ -1.02
COPB1-211ENST00000534234 TMEM126BQ8IUX1 230 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms