RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 CHURC1-FNTBB4DL54 471 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 FAM72CH0Y354 149 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 TNFRSF11BO00300 401 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 NADKO95544 446 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 WNT7BP56706 349 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 TRIM71Q2Q1W2 868 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 FAM72AQ5TYM5 149 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 FAM72DQ6L9T8 149 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 FAM72BQ86X60 149 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 SRFBP1Q8NEF9 429 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 KIFC1Q9BW19 673 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 INTS7Q9NVH2 962 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 FADS2O95864 444 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 CCR3P51677 355 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 ECT2LQ008S8 904 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 LAPTM5Q13571 262 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 CHST15Q7LFX5 561 aaPredicted RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 CYP2U1Q7Z449 544 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 FAM81AQ8TBF8 368 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 STRA6Q9BX79 667 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 TRIT1Q9H3H1 467 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 GULP1Q9UBP9 304 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 MRPS33Q9Y291 106 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 MRPS7Q9Y2R9 242 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 MTMR11A4FU01 709 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 CXCR6O00574 342 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 BEST1O76090 585 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 KLHL12Q53G59 568 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 C11orf88Q6PI97 169 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 ADAM7Q9H2U9 754 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 RAPGEFL1Q9UHV5 662 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 RUVBL1Q9Y265 456 aaKnown RBP17.29■□□□□ 0.36
PHRF1-205ENST00000533464 ZNF487B1APH4 448 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 OR1F1O43749 312 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 MTX2O75431 263 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 ITGAXP20702 1163 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 MPP2Q14168 576 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 UBXN11Q5T124 520 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 SLC34A3Q8N130 599 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 PHTF2Q8N3S3 785 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 PHC3Q8NDX5 983 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 OR2AG1Q9H205 316 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 EBF2Q9HAK2 575 aa17.29■□□□□ 0.36
PHRF1-205ENST00000533464 CDC7O00311 574 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 TP73O15350 636 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 TYROBPO43914 113 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 VIPP01282 170 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 XRCC1P18887 633 aaPredicted RBP17.28■□□□□ 0.36
PHRF1-205ENST00000533464 CHRNA6Q15825 494 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 FRMD7Q6ZUT3 714 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 C14orf80Q86SX3 495 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 POC5Q8NA72 575 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 NSMCE3Q96MG7 304 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 HAPLN2Q9GZV7 340 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 OSER1Q9NX31 292 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 IGKV6-21A0A0C4DH24 114 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 IFNW1P05000 195 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 YAP1P46937 504 aaKnown RBP17.28■□□□□ 0.36
PHRF1-205ENST00000533464 HERC3Q15034 1050 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 LDLRAP1Q5SW96 308 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 AGMOQ6ZNB7 445 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 CLDN19Q8N6F1 224 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 TMEM175Q9BSA9 504 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 hCG_2039718K7EN88 272 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 ANGPTL1O95841 491 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 KHDRBS2Q5VWX1 349 aaKnown RBP17.28■□□□□ 0.36
PHRF1-205ENST00000533464 TMC5Q6UXY8 1006 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 PIK3C3Q8NEB9 887 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 OR2AP1Q8NGE2 309 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 TMEM209Q96SK2 561 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 IGKV6D-21A0A0A0MT36 114 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 STX16-NPEPL1H3BU86 382 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 SCAMP1O15126 338 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 SRSF11Q05519 484 aaKnown RBP17.28■□□□□ 0.36
PHRF1-205ENST00000533464 MBLAC2Q68D91 279 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 ZNF280BQ86YH2 543 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 FAM53CQ9NYF3 392 aa17.28■□□□□ 0.36
PHRF1-205ENST00000533464 SLC31A1O15431 190 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 AOC2O75106 756 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 HAPLN1P10915 354 aaPredicted RBP17.27■□□□□ 0.36
PHRF1-205ENST00000533464 ATP12AP54707 1039 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 SERINC3Q13530 473 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 PCLAFQ15004 111 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 KLHL17Q6TDP4 642 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 FLCNQ8NFG4 579 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 PTPN18Q99952 460 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 ADAMTS10Q9H324 1103 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 ZDHHC3Q9NYG2 299 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.27■□□□□ 0.363e-8■■■■■ 33.2
PHRF1-205ENST00000533464 RWDD3Q9Y3V2 267 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 GTPBP1O00178 669 aaKnown RBP17.27■□□□□ 0.36
PHRF1-205ENST00000533464 ERVK-21P61565 698 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 UPP1Q16831 310 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 SLC39A3Q9BRY0 314 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 GDPD4Q6W3E5 623 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 CILP2Q8IUL8 1156 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 CMTM8Q8IZV2 173 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 ZNF461Q8TAF7 563 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 SLC9A6Q92581 669 aa17.27■□□□□ 0.36
PHRF1-205ENST00000533464 LRRC3Q9BY71 257 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms