RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PACS1Q6VY07 963 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 PIANPQ8IYJ0 282 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 CFAP206Q8IYR0 622 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 LSM14AQ8ND56 463 aaKnown RBP16.27■□□□□ 0.2
PKP3-209ENST00000533069 PPHLN1Q8NEY8 458 aaKnown RBP16.27■□□□□ 0.2
PKP3-209ENST00000533069 OR13J1Q8NGT2 312 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 NAT14Q8WUY8 206 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 INSM2Q96T92 566 aaPredicted RBP16.27■□□□□ 0.2
PKP3-209ENST00000533069 TTC1Q99614 292 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 FAM129AQ9BZQ8 928 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ZNF768Q9H5H4 540 aaKnown RBP16.27■□□□□ 0.2
PKP3-209ENST00000533069 COG4Q9H9E3 785 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 FAM8A1Q9UBU6 413 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 UTP11Q9Y3A2 253 aaKnown RBP16.27■□□□□ 0.2
PKP3-209ENST00000533069 B3GALT1Q9Y5Z6 326 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 COLEC10Q9Y6Z7 277 aa16.27■□□□□ 0.2
PKP3-209ENST00000533069 ZFC3H1O60293 1989 aaKnown RBP16.27■□□□□ 0.19
PKP3-209ENST00000533069 UNC13CQ8NB66 2214 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 CCDC78A2IDD5 438 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 CCDC162PA2VCL2 907 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 FOXN2P32314 431 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 BASP1P80723 227 aaKnown RBP16.26■□□□□ 0.19
PKP3-209ENST00000533069 CDK16Q00536 496 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 RPA4Q13156 261 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 PPP1R7Q15435 360 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 MANEAQ5SRI9 462 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 ANKS6Q68DC2 871 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 CAPRIN2Q6IMN6 1127 aaKnown RBP16.26■□□□□ 0.19
PKP3-209ENST00000533069 CERS6Q6ZMG9 384 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 BBOF1Q8ND07 529 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 MYRIPQ8NFW9 859 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 PMEPA1Q969W9 287 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 RMDN2Q96LZ7 410 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 KIR3DX1Q9H7L2 352 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 WDR70Q9NW82 654 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 SIDT1Q9NXL6 827 aaKnown RBP16.26■□□□□ 0.19
PKP3-209ENST00000533069 TCAF1Q9Y4C2 921 aa16.26■□□□□ 0.19
PKP3-209ENST00000533069 CFAP20Q9Y6A4 193 aaKnown RBP16.26■□□□□ 0.19
PKP3-209ENST00000533069 F8W8V4 182 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 ERVH48-1M5A8F1 160 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 SMAPO00193 183 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 IFRD1O00458 451 aaPredicted RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 ATXN7O15265 892 aaPredicted RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 RASSF9O75901 435 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 POLBP06746 335 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 PRSS56P0CW18 603 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 KCNJ1P48048 391 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 LEPRP48357 1165 aaKnown RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 CD151P48509 253 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 PTK6Q13882 451 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 KRT33BQ14525 404 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 ZNF658BQ4V348 819 aaPredicted RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 PCID2Q5JVF3 399 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 TEX35Q5T0J7 233 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 IRGCQ6NXR0 463 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 DUS1LQ6P1R4 473 aaKnown RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 TTC27Q6P3X3 843 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 CYB5D1Q6P9G0 228 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 CLDN19Q8N6F1 224 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 EIF1ADQ8N9N8 165 aaKnown RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 NOA1Q8NC60 698 aaKnown RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 SPDYE1Q8NFV5 336 aaPredicted RBP16.25■□□□□ 0.19
PKP3-209ENST00000533069 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.25■□□□□ 0.19
PKP3-209ENST00000533069 HDAC10Q969S8 669 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 SGSM3Q96HU1 749 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 CD180Q99467 661 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 IL22Q9GZX6 179 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 SLC24A2Q9UI40 661 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 LOC400499M0QZD8 3231 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 PTPRQQ9UMZ3 2332 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 KIF26BQ2KJY2 2108 aa16.25■□□□□ 0.19
PKP3-209ENST00000533069 OR5K3A6NET4 321 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 OR51F1A6NGY5 319 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 TK2O00142 265 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 LIN7AO14910 233 aaPredicted RBP16.24■□□□□ 0.19
PKP3-209ENST00000533069 POLR1CO15160 346 aaPredicted RBP16.24■□□□□ 0.19
PKP3-209ENST00000533069 GOT2P00505 430 aaKnown RBP16.24■□□□□ 0.19
PKP3-209ENST00000533069 FTH1P02794 183 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 TPSB2P20231 275 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 PPARGP37231 505 aaPredicted RBP16.24■□□□□ 0.19
PKP3-209ENST00000533069 PRAMEP78395 509 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 TPSAB1Q15661 275 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 AARS2Q5JTZ9 985 aaKnown RBP16.24■□□□□ 0.19
PKP3-209ENST00000533069 CACHD1Q5VU97 1274 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 PCGF5Q86SE9 256 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 OOSP2Q86WS3 158 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 LILRA3Q8N6C8 439 aaPredicted RBP16.24■□□□□ 0.19
PKP3-209ENST00000533069 ACVR1CQ8NER5 493 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 OR4L1Q8NH43 312 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 KLHL6Q8WZ60 621 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 NKD1Q969G9 470 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 ERP44Q9BS26 406 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 OR52A5Q9H2C5 316 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 BFARQ9NZS9 450 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 SEMA5BQ9P283 1151 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 SLC2A6Q9UGQ3 507 aa16.24■□□□□ 0.19
PKP3-209ENST00000533069 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 EIF4E1BA6NMX2 242 aaKnown RBP16.23■□□□□ 0.19
PKP3-209ENST00000533069 EFSO43281 561 aa16.23■□□□□ 0.19
PKP3-209ENST00000533069 CTIFO43310 598 aaKnown RBP16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms