RNA–Protein interactions for RNA: ENST00000531995.1

PUF60-218, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 631 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-218ENST00000531995 LIPCP11150 499 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 CARSP49589 748 aaKnown RBP18.24■□□□□ 0.51
PUF60-218ENST00000531995 CLCNKAP51800 687 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 LRP8Q14114 963 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 LONRF1Q17RB8 773 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 TYSND1Q2T9J0 566 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 PLA2G4EQ3MJ16 856 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 AMZ1Q400G9 498 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 ZNF789Q5FWF6 425 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 SPANXN3Q5MJ09 141 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 SLITRK4Q8IW52 837 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.24■□□□□ 0.51
PUF60-218ENST00000531995 FBXO36Q8NEA4 188 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 MED8Q96G25 268 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 LINC00615Q96LM1 132 aaPredicted RBP18.24■□□□□ 0.51
PUF60-218ENST00000531995 TTC25Q96NG3 672 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 TIMM29Q9BSF4 260 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 NAT9Q9BTE0 207 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 GSDMCQ9BYG8 508 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 ZCCHC2Q9C0B9 1178 aaKnown RBP18.24■□□□□ 0.51
PUF60-218ENST00000531995 P2RY12Q9H244 342 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 SEMA6CQ9H3T2 930 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 FAM114A2Q9NRY5 505 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 TBC1D29Q9UFV1 150 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 ZC3H7BQ9UGR2 993 aaKnown RBP18.24■□□□□ 0.51
PUF60-218ENST00000531995 KCNK6Q9Y257 313 aa18.24■□□□□ 0.51
PUF60-218ENST00000531995 DNMT3AQ9Y6K1 912 aaPredicted RBP18.24■□□□□ 0.51
PUF60-218ENST00000531995 A6NCN8 305 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 EIF3HO15372 352 aaKnown RBP eCLIP18.23■□□□□ 0.51
PUF60-218ENST00000531995 TTC4O95801 387 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 F7P08709 466 aaPredicted RBP18.23■□□□□ 0.51
PUF60-218ENST00000531995 PAMP19021 973 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 ZFP36L1Q07352 338 aaKnown RBP18.23■□□□□ 0.51
PUF60-218ENST00000531995 ILF3Q12906 894 aaKnown RBP eCLIP18.23■□□□□ 0.51
PUF60-218ENST00000531995 GTF2H3Q13889 308 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 C16orf72Q14CZ0 275 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 TRMT10BQ6PF06 316 aaKnown RBP18.23■□□□□ 0.51
PUF60-218ENST00000531995 SLC30A9Q6PML9 568 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 FAM83HQ6ZRV2 1179 aaPredicted RBP18.23■□□□□ 0.51
PUF60-218ENST00000531995 C17orf82Q86X59 251 aaPredicted RBP18.23■□□□□ 0.51
PUF60-218ENST00000531995 ZFAND4Q86XD8 727 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 CILP2Q8IUL8 1156 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 TRAPPC5Q8IUR0 188 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 ZDHHC1Q8WTX9 485 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 PATE1Q8WXA2 126 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 DCUN1D1Q96GG9 259 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 SAYSD1Q9NPB0 183 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 KLC4Q9NSK0 619 aa18.23■□□□□ 0.51
PUF60-218ENST00000531995 C20orf96Q9NUD7 363 aaPredicted RBP18.23■□□□□ 0.51
PUF60-218ENST00000531995 B8ZZF3 427 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 NUDT21O43809 227 aaKnown RBP18.22■□□□□ 0.51
PUF60-218ENST00000531995 SLC28A2O43868 658 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 S1PR4O95977 384 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 RHOXF2BP0C7M4 288 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 ERVK-10P10266 1014 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 ACTR1BP42025 376 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 NSG1P42857 185 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 PRLHRP49683 370 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 OR1D5P58170 312 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 ACTR1AP61163 376 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 DMPKQ09013 629 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 FRG1Q14331 258 aaKnown RBP18.22■□□□□ 0.51
PUF60-218ENST00000531995 HSP90AA5PQ58FG0 334 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 PRICKLE2Q7Z3G6 844 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 DENND6AQ8IWF6 608 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 ZBED8Q8IZ13 594 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 RCBTB1Q8NDN9 531 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 EXTL1Q92935 676 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 USP7Q93009 1102 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 CFAP36Q96G28 342 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 ZNF514Q96K75 400 aaPredicted RBP18.22■□□□□ 0.51
PUF60-218ENST00000531995 RHOXF2Q9BQY4 288 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 NUDT22Q9BRQ3 303 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 PHACTR1Q9C0D0 580 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 MOCS1Q9NZB8 636 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 ACSL6Q9UKU0 697 aa18.22■□□□□ 0.51
PUF60-218ENST00000531995 MGAT4DA6NG13 374 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 C9orf172C9J069 976 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 CFAP99D6REC4 459 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 AP2A2O94973 939 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 RALBP11234 206 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 BRAFP15056 766 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 PNLIPP16233 465 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 OGNP20774 298 aaKnown RBP18.21■□□□□ 0.51
PUF60-218ENST00000531995 ALDH4A1P30038 563 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 TTPAP49638 278 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 GPX6P59796 221 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 CTBP1Q13363 440 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 AARS2Q5JTZ9 985 aaKnown RBP18.21■□□□□ 0.51
PUF60-218ENST00000531995 MANEAQ5SRI9 462 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 MRNIPQ6NTE8 343 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 USP53Q70EK8 1073 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 AMZ2Q86W34 360 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 NAGSQ8N159 534 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 LILRA3Q8N6C8 439 aaPredicted RBP18.21■□□□□ 0.51
PUF60-218ENST00000531995 OR2L2Q8NH16 312 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 JPH3Q8WXH2 748 aaPredicted RBP18.21■□□□□ 0.51
PUF60-218ENST00000531995 IFT81Q8WYA0 676 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 LPGAT1Q92604 370 aa18.21■□□□□ 0.51
PUF60-218ENST00000531995 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms