RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 FAXCQ5TGI0 409 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 CLEC18BQ6UXF7 455 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 BZW1Q7L1Q6 419 aaKnown RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 KRTAP1-3Q8IUG1 177 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 TAB3Q8N5C8 712 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 RNF10Q8N5U6 811 aaKnown RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF655Q8N720 491 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 CLEC18CQ8NCF0 446 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 OR1E3Q8WZA6 343 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 USP7Q93009 1102 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 DTD2Q96FN9 168 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 OXNAD1Q96HP4 312 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 TM9SF2Q99805 663 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 GORASP1Q9BQQ3 440 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 MLPHQ9BV36 600 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 C1QTNF7Q9BXJ2 289 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 SLC25A51Q9H1U9 297 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 ABCG8Q9H221 673 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 ZNF71Q9NQZ8 489 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 APOBEC3BQ9UH17 382 aaKnown RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 SHOC2Q9UQ13 582 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 EFR3BQ9Y2G0 817 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 CSNK1G3Q9Y6M4 447 aa6.93□□□□□ -1.3
TRIM53CP-201ENST00000531490 ICE1Q9Y2F5 2266 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 DOPEY1Q5JWR5 2465 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 POLQO75417 2590 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 LOC285095A0A1B0GVY8 99 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 LMO7DNF2Z398 122 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 KRT86O43790 486 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 ANXA6P08133 673 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 JMJD7P0C870 316 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 RBP3P10745 1247 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 CYP2A6P11509 494 aaPredicted RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 PTPN7P35236 360 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 POLD2P49005 469 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 HK3P52790 923 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 MAPK10P53779 464 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 WNT3AP56704 352 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 EIF3EP60228 445 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 SRP54P61011 504 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 PPARDQ03181 441 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 CDK18Q07002 472 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 KLF1Q13351 362 aaPredicted RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 XRCC4Q13426 336 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 MTM1Q13496 603 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 OLIG2Q13516 323 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 ARHGEF7Q14155 803 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 PTK2BQ14289 1009 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 NFATC4Q14934 902 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCDC181Q5TID7 509 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 ESRP1Q6NXG1 681 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 KDELC1Q6UW63 502 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 MACC1Q6ZN28 852 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 RNF111Q6ZNA4 994 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 USP45Q70EL2 814 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 TMPRSS9Q7Z410 1059 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCDC112Q8NEF3 446 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCL4L1Q8NHW4 92 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 NAT6Q93015 286 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 NUS1Q96E22 293 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 PDXPQ96GD0 296 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 DHRS1Q96LJ7 313 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 QKIQ96PU8 341 aaKnown RBP eCLIP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 FCRL5Q96RD9 977 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 GFM1Q96RP9 751 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 LYSMD1Q96S90 227 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 RIOK2Q9BVS4 552 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 TMEM168Q9H0V1 697 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 FGF22Q9HCT0 170 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 NCKIPSDQ9NZQ3 722 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 SPASTQ9UBP0 616 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 SUCOQ9UBS9 1254 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 ACSL6Q9UKU0 697 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 CNOT6Q9ULM6 557 aaKnown RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 TMEM98Q9Y2Y6 226 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 PLEKHM1Q9Y4G2 1056 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 SPO11Q9Y5K1 396 aa6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 PCYT1BQ9Y5K3 369 aaPredicted RBP6.92□□□□□ -1.3
TRIM53CP-201ENST00000531490 COL27A1Q8IZC6 1860 aaPredicted RBP6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 C1orf232A0A0U1RR37 186 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 GOLGA6CA6NDK9 693 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 GOLGA6BA6NDN3 693 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 MIF4GDA9UHW6 222 aaKnown RBP6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 HACD1B0YJ81 288 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 PSMD11O00231 422 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 TOR1BO14657 336 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 TPP1O14773 563 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 INPP4BO15327 924 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 NVLO15381 856 aaKnown RBP6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 KCNN4O15554 427 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 BUD23O43709 281 aaKnown RBP6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 TJP3O95049 919 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 AGTP01019 485 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 ATP1A1P05023 1023 aaKnown RBP6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 GOLGA6DP0CG33 693 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 SFTPCP11686 197 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 CCL4P13236 92 aa6.91□□□□□ -1.3
TRIM53CP-201ENST00000531490 CA5AP35218 305 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms