RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 GLRBP48167 497 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SLC1A6P48664 564 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 HNMTP50135 292 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SEC24CP53992 1094 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 ALDH18A1P54886 795 aaKnown RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 AP1S2P56377 157 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 ABCE1P61221 599 aaKnown RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 OCRLQ01968 901 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 BST1Q10588 318 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 RCN2Q14257 317 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 IRF4Q15306 451 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SYTL3Q4VX76 610 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 CFAP157Q5JU67 520 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SEL1L3Q68CR1 1132 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 TMEM220Q6QAJ8 160 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 PIGWQ7Z7B1 504 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 LRRTM4Q86VH4 590 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 HEATR4Q86WZ0 1026 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 GPSM1Q86YR5 675 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 WDR75Q8IWA0 830 aaKnown RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 LRRC34Q8IZ02 419 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 AFAP1L2Q8N4X5 818 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 BEND7Q8N7W2 519 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 PNPLA1Q8N8W4 532 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 PHC3Q8NDX5 983 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 OR2L2Q8NH16 312 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 GIMAP7Q8NHV1 300 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 STON2Q8WXE9 905 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 ELMO1Q92556 727 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 FUBP1Q96AE4 644 aaKnown RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SGF29Q96ES7 293 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 FAR2Q96K12 515 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 FOPNLQ96NB1 174 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 NECAB3Q96P71 396 aaPredicted RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 TRIM55Q9BYV6 548 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 STN1Q9H668 368 aaKnown RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 KLHL14Q9P2G3 628 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 CPSF2Q9P2I0 782 aaKnown RBP9.68□□□□□ -0.86
CTNND1-228ENST00000531007 HAO1Q9UJM8 370 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SIT1Q9Y3P8 196 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 OARD1Q9Y530 152 aa9.68□□□□□ -0.86
CTNND1-228ENST00000531007 SLC5A10A0PJK1 596 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 IQCF5A8MTL0 148 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PRAMEF26H0Y7S4 382 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 K7ESM1 405 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 TNFRSF10CO14798 259 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 KMOO15229 486 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 INPP4BO15327 924 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 DLX3O60479 287 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SNX3O60493 162 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SNX2O60749 519 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PCCBP05166 539 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 HIST1H2AGP0C0S8 130 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 GFAPP14136 432 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 HIST1H2ADP20671 130 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 CYP2A7P20853 494 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 HTR1BP28222 390 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PIK3CGP48736 1102 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 HERVK_113P63132 956 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 IRX4P78413 519 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 INSM1Q01101 510 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 DMPKQ09013 629 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PRKAA1Q13131 559 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 INPP5AQ14642 412 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 TGFBIQ15582 683 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 KIAA0895LQ68EN5 471 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SLC36A4Q6YBV0 504 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 CYHR1Q6ZMK1 362 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 Q6ZS52 159 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SPATA21Q7Z572 469 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 CACUL1Q86Y37 369 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 DCP2Q8IU60 420 aaKnown RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 TRAPPC5Q8IUR0 188 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SLC22A15Q8IZD6 547 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 FBXO39Q8N4B4 442 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 OXR1Q8N573 874 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PDPRQ8NCN5 879 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 FBXO15Q8NCQ5 510 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 CADM4Q8NFZ8 388 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PIWIL2Q8TC59 973 aaKnown RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 MAGEC3Q8TD91 643 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 MCOLN3Q8TDD5 553 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 ZNF473Q8WTR7 871 aaKnown RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 ATL1Q8WXF7 558 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PTERQ96BW5 349 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SCARF2Q96GP6 870 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 HIST1H2AHQ96KK5 128 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 INSM2Q96T92 566 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SLC30A3Q99726 388 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 HIST1H2AJQ99878 128 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 TIMM29Q9BSF4 260 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 H2AFJQ9BTM1 129 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 MECRQ9BV79 373 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 SLC12A9Q9BXP2 914 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 ERVK-6Q9BXR3 956 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 ILKAPQ9H0C8 392 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 OR2AG1Q9H205 316 aa9.67□□□□□ -0.86
CTNND1-228ENST00000531007 C12orf65Q9H3J6 166 aaKnown RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 ZNF395Q9H8N7 513 aaPredicted RBP9.67□□□□□ -0.86
CTNND1-228ENST00000531007 PARVBQ9HBI1 364 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms