RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 DHX40Q8IX18 779 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 DIS3L2Q8IYB7 885 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 GJC3Q8NFK1 279 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 RDM1Q8NG50 284 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 PIBF1Q8WXW3 757 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SKA1Q96BD8 255 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 APOLD1Q96LR9 279 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 RIT2Q99578 217 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 H2AFJQ9BTM1 129 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 C6orf50Q9HD87 102 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 ZNF302Q9NR11 478 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SMYD2Q9NRG4 433 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 TMEM161AQ9NX61 479 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 PLK2Q9NYY3 685 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 WWOXQ9NZC7 414 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 STK39Q9UEW8 545 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 INTS6Q9UL03 887 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 LRP12Q9Y561 859 aa4.79□□□□□ -1.64
CSDE1-212ENST00000529046 SRPRBQ9Y5M8 271 aaKnown RBP4.79□□□□□ -1.64
CSDE1-212ENST00000529046 BAZ2BQ9UIF8 2168 aaKnown RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CNTNAP2Q9UHC6 1331 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 IGHV4-28A0A0C4DH34 117 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 A0A1W2PQF6 199 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 LACTBL1A8MY62 500 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 INAFM1C9JVW0 142 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 USO1O60763 962 aaKnown RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 PAGE4O60829 102 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 TBX10O75333 385 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 C22orf31O95567 290 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CYP1A2P05177 515 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 IRF1P10914 325 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 IFNAR1P17181 557 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 HOXB8P17481 243 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 DNAJB1P25685 340 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 POU1F1P28069 291 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CDAP32320 146 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 MAN1A1P33908 653 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 HSPA4P34932 840 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 PMS2P54278 862 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 DCAF7P61962 342 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CAPSQ13938 189 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 GIT2Q14161 759 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 GSTA3Q16772 222 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 SGO1Q5FBB7 561 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 FAAH2Q6GMR7 532 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 GALNT17Q6IS24 598 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 KRTAP5-11Q6L8G4 156 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 C8orf82Q6P1X6 216 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 PLA2G4DQ86XP0 818 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CCDC60Q8IWA6 550 aaPredicted RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 KIAA2013Q8IYS2 634 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 PRR26Q8N8Z3 221 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CCDC148Q8NFR7 591 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CADM4Q8NFZ8 388 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 B4GALNT2Q8NHY0 566 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 SUSD6Q92537 303 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 HDAC2Q92769 488 aaKnown RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 GFM1Q96RP9 751 aaKnown RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 MAP7D2Q96T17 732 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 ZNF577Q9BSK1 485 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 TMEM117Q9H0C3 514 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CWH43Q9H720 699 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 SCPEP1Q9HB40 452 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 NRBP2Q9NSY0 501 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 ABI3Q9P2A4 366 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CAMK2AQ9UQM7 478 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 CAPN7Q9Y6W3 813 aa4.78□□□□□ -1.64
CSDE1-212ENST00000529046 TCF20Q9UGU0 1960 aaKnown RBP4.78□□□□□ -1.64
CSDE1-212ENST00000529046 IGKV6-21A0A0C4DH24 114 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 KLF18A0A0U1RQI7 1052 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 DENND3A2RUS2 1198 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 EDIL3O43854 480 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 REC8O95072 547 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 DARSP14868 501 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 PSMA5P28066 241 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 HARS2P49590 506 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 METAP2P50579 478 aaKnown RBP eCLIP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 CTTNQ14247 550 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 ALG11Q2TAA5 492 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 OTUD1Q5VV17 481 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 FAM180BQ6P0A1 224 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 CDC73Q6P1J9 531 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 CPLX2Q6PUV4 134 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 Q6ZTK2 550 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 MON1BQ7L1V2 547 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 RSRC2Q7L4I2 434 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 LINGO2Q7L985 606 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 ADGRD2Q7Z7M1 963 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 NOXA1Q86UR1 476 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 ZNF410Q86VK4 478 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 FAM228AQ86W67 206 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 COLGALT1Q8NBJ5 622 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 MRPS27Q92552 414 aaKnown RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 FBXL8Q96CD0 374 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 PERPQ96FX8 193 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 ZNF274Q96GC6 653 aaPredicted RBP4.77□□□□□ -1.65
CSDE1-212ENST00000529046 MBOAT7Q96N66 472 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 CASD1Q96PB1 797 aa4.77□□□□□ -1.65
CSDE1-212ENST00000529046 SLITRK1Q96PX8 696 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms