RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 BPIFA3Q9BQP9 254 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 CCM2Q9BSQ5 444 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 SRMSQ9H3Y6 488 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 PCMTD2Q9NV79 361 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 ASF1BQ9NVP2 202 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 FAM8A1Q9UBU6 413 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 NDOR1Q9UHB4 597 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 FAM153AQ9UHL3 310 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 POMT2Q9UKY4 750 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 SPO11Q9Y5K1 396 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 SEC16AO15027 2179 aa11.24□□□□□ -0.61
CMTM1-211ENST00000528484 PIKFYVEQ9Y2I7 2098 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 A0A087X0T9 212 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 A0A1B0GTH6 734 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 A0A1W2PQJ5 194 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 HNRNPRO43390 633 aaKnown RBP11.23□□□□□ -0.61
CMTM1-211ENST00000528484 LDB2O43679 373 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A9O60656 530 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 FAM228BP0C875 321 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A6P19224 532 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A1P22309 533 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A4P22310 534 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 FOLR3P41439 243 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 TAS2R40P59535 323 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 ABRQ12979 859 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 SSPNQ14714 243 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 PTCHD3Q3KNS1 767 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 PLEKHN1Q494U1 663 aaPredicted RBP11.23□□□□□ -0.61
CMTM1-211ENST00000528484 ANO6Q4KMQ2 910 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 IRAK1BP1Q5VVH5 260 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 MLIPQ5VWP3 458 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 DUS1LQ6P1R4 473 aaKnown RBP11.23□□□□□ -0.61
CMTM1-211ENST00000528484 FAM198BQ6UWH4 519 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 B4GALNT4Q76KP1 1039 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 MRGPREQ86SM8 312 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 VSIG1Q86XK7 387 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 RFX6Q8HWS3 928 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 SRRM1Q8IYB3 904 aaKnown RBP11.23□□□□□ -0.61
CMTM1-211ENST00000528484 GALNT16Q8N428 558 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 SLC25A41Q8N5S1 370 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 PLD5Q8N7P1 536 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 ACVR1CQ8NER5 493 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 OR4E2Q8NGC2 313 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 OR2L2Q8NH16 312 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 RAPGEF5Q92565 580 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 FSD1LQ9BXM9 530 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 VPS37BQ9H9H4 285 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A7Q9HAW7 530 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A10Q9HAW8 530 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UGT1A8Q9HAW9 530 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 UBP1Q9NZI7 540 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 TMPRSS11EQ9UL52 423 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 AP1M2Q9Y6Q5 423 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 SPTBP11277 2137 aa11.23□□□□□ -0.61
CMTM1-211ENST00000528484 C2orf81A6NN90 581 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 CFAP99D6REC4 459 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 STX7O15400 261 aaKnown RBP11.22□□□□□ -0.61
CMTM1-211ENST00000528484 DDX3YO15523 660 aaKnown RBP11.22□□□□□ -0.61
CMTM1-211ENST00000528484 PRAMEF1O95521 474 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 MBD3O95983 291 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 EPOP01588 193 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 NR2C2P49116 596 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 WNT3AP56704 352 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 ZBED6P86452 979 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 MESDQ14696 234 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 PRAMEF17Q5VTA0 474 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 FAM69BQ5VUD6 431 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 SLC9A4Q6AI14 798 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 LCN10Q6JVE6 187 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 FBXO38Q6PIJ6 1188 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 IGFL3Q6UXB1 125 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 CFAP206Q8IYR0 622 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 ST6GALNAC3Q8NDV1 305 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 OR1L3Q8NH93 324 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 HM13Q8TCT9 377 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 ZNF398Q8TD17 642 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 COG1Q8WTW3 980 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 TFB1MQ8WVM0 346 aaKnown RBP11.22□□□□□ -0.61
CMTM1-211ENST00000528484 UBE2Q2Q8WVN8 375 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 TADA1Q96BN2 335 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 TEKT5Q96M29 485 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 FERD3LQ96RJ6 166 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 TXLNGQ9NUQ3 528 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 SMOXQ9NWM0 555 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 IRAK4Q9NWZ3 460 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 IL17CQ9P0M4 197 aa11.22□□□□□ -0.61
CMTM1-211ENST00000528484 KLHL8Q9P2G9 620 aaPredicted RBP11.22□□□□□ -0.61
CMTM1-211ENST00000528484 IFT80Q9P2H3 777 aaPredicted RBP11.22□□□□□ -0.61
CMTM1-211ENST00000528484 PTRH2Q9Y3E5 179 aaKnown RBP11.22□□□□□ -0.61
CMTM1-211ENST00000528484 DIDO1Q9BTC0 2240 aaKnown RBP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 LOC285095A0A1B0GVY8 99 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 C2orf74A8MZ97 194 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 ZNF749O43361 778 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 LCA5LO95447 670 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 KRT1P04264 644 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 POLBP06746 335 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 PRDX3P30048 256 aaKnown RBP11.21□□□□□ -0.61
CMTM1-211ENST00000528484 LMAN1P49257 510 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 DYNLT1P63172 113 aa11.21□□□□□ -0.61
CMTM1-211ENST00000528484 SIRPB2Q5JXA9 342 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms