RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 C2CD3Q4AC94 2353 aa11.35□□□□□ -0.59
CCDC90B-210ENST00000528149 CXorf49A8MYA2 514 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 AGRPO00253 132 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 CHUKO15111 745 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 S1PR4O95977 384 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 TNFP01375 233 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 C1QAP02745 245 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 MPOP05164 745 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 GSTA2P09210 222 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 CTSEP14091 401 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 ATP1B2P14415 290 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 ITGB6P18564 788 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 STX2P32856 288 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 PPARGP37231 505 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 PRLHRP49683 370 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 PMS2P54278 862 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 MAZP56270 477 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 HNRNPKP61978 463 aaKnown RBP eCLIP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 SLMAPQ14BN4 828 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 INSCQ1MX18 579 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 CTSL3PQ5NE16 218 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 TEDDM1Q5T9Z0 273 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 RNF187Q5TA31 235 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 WDR93Q6P2C0 686 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 CNSTQ6PJW8 725 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 TMEM220Q6QAJ8 160 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 ATG14Q6ZNE5 492 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 CHST15Q7LFX5 561 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 SDCCAG8Q86SQ7 713 aaPredicted RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 EXD3Q8N9H8 876 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 OR4C6Q8NH72 309 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 LKAAEAR1Q8TD35 194 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 TTC1Q99614 292 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 RMI1Q9H9A7 625 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 SPATS2LQ9NUQ6 558 aaKnown RBP11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 ZFATQ9P243 1243 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 KCNK6Q9Y257 313 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 CRYL1Q9Y2S2 319 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 PSAT1Q9Y617 370 aa11.34□□□□□ -0.59
CCDC90B-210ENST00000528149 RP1P56715 2156 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 FAM159BA6NKW6 160 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 IQCF5A8MTL0 148 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 B4DGG1 531 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 GPR89AB7ZAQ6 455 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 K7ENP7 123 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 PRMT5O14744 637 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 SPAG6O75602 509 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 GPR89BP0CG08 455 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 ZNF7P17097 686 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 FMO4P31512 558 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 NSG1P42857 185 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 BLKP51451 505 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 UBAP2LQ14157 1087 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 KBTBD12Q3ZCT8 623 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 BCL7AQ4VC05 210 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 INO80CQ6PI98 192 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 SLC30A9Q6PML9 568 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 C11orf96Q7Z7L8 435 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 CTAGE3PQ8IX95 158 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 KRT222Q8N1A0 295 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 CACTIN-AS1Q8N1I8 211 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 AENQ8WTP8 325 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 HEXDCQ8WVB3 486 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 UBLCP1Q8WVY7 318 aaPredicted RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 FAM136AQ96C01 138 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 ATXN7L3BQ96GX2 97 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 EPB41L4BQ9H329 900 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 OSGEPL1Q9H4B0 414 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 INTS10Q9NVR2 710 aaKnown RBP11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 SPASTQ9UBP0 616 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 SLC23A2Q9UGH3 650 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 GNPTGQ9UJJ9 305 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 RAB21Q9UL25 225 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 DNAJC16Q9Y2G8 782 aa11.33□□□□□ -0.6
CCDC90B-210ENST00000528149 TRBV23OR9-2A0A075B6M9 112 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 PRAMEF33A0A0G2JMD5 474 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 CPED1A4D0V7 1026 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 PFDN6O15212 129 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 KMOO15229 486 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 YKT6O15498 198 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 RIPK2O43353 540 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 NOBOXO60393 691 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 DFNA5O60443 496 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 NIPSNAP2O75323 286 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 POP7O75817 140 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 HAUS5O94927 633 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 AP2A2O94973 939 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 RPS3P23396 243 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 MCM3P25205 808 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 GABRB3P28472 473 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 PHBP35232 272 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ACTR1BP42025 376 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ACTR1AP61163 376 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 GABREP78334 506 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 CTBSQ01459 385 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ILF3Q12906 894 aaKnown RBP eCLIP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 ILKQ13418 452 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 C4orf17Q53FE4 359 aa11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 RBM20Q5T481 1227 aaKnown RBP11.32□□□□□ -0.6
CCDC90B-210ENST00000528149 PTRHD1Q6GMV3 140 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms