RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SEPT6Q14141 434 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 KRT33BQ14525 404 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 DNTTIP2Q5QJE6 756 aaKnown RBP13.85□□□□□ -0.19
CAPN1-212ENST00000527887 PRICKLE2Q7Z3G6 844 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 LINC00523Q86TU6 105 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 CFAP206Q8IYR0 622 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 UNC5BQ8IZJ1 945 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 KIF18AQ8NI77 898 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 ALS2CR12Q96Q35 445 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 TUBB2BQ9BVA1 445 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 SYTL2Q9HCH5 934 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 NLE1Q9NVX2 485 aaPredicted RBP13.85□□□□□ -0.19
CAPN1-212ENST00000527887 IL17BQ9UHF5 180 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 SLC24A2Q9UI40 661 aa13.85□□□□□ -0.19
CAPN1-212ENST00000527887 ERI2A8K979 691 aaKnown RBP13.84□□□□□ -0.19
CAPN1-212ENST00000527887 QSOX1O00391 747 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 IFRD1O00458 451 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-212ENST00000527887 AP2A2O94973 939 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 AP2A1O95782 977 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 ZNF28P17035 718 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 PSMA3P25788 255 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 MC4RP32245 332 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 DLSTP36957 453 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 CSRP3P50461 194 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 PRKAA1Q13131 559 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 TUBB3Q13509 450 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 OLIG2Q13516 323 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 SKIDA1Q1XH10 827 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 TMTC4Q5T4D3 741 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 AADACL2Q6P093 401 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 D2HGDHQ8N465 521 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 FAM71DQ8N9W8 422 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 GALNT6Q8NCL4 622 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 ACVR1CQ8NER5 493 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 SLC35B2Q8TB61 432 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 HES6Q96HZ4 224 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 C16orf45Q96MC5 204 aaPredicted RBP13.84□□□□□ -0.19
CAPN1-212ENST00000527887 MAP3K3Q99759 626 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 FAM118BQ9BPY3 351 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 GPR87Q9BY21 358 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 CLMPQ9H6B4 373 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 FGF21Q9NSA1 209 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 LNPEPQ9UIQ6 1025 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 CROTQ9UKG9 612 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 CFAP20Q9Y6A4 193 aaKnown RBP13.84□□□□□ -0.19
CAPN1-212ENST00000527887 BSNQ9UPA5 3926 aa13.84□□□□□ -0.19
CAPN1-212ENST00000527887 OR6C74A6NCV1 312 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 TERTO14746 1132 aaKnown RBP13.83□□□□□ -0.2
CAPN1-212ENST00000527887 DDX3YO15523 660 aaKnown RBP13.83□□□□□ -0.2
CAPN1-212ENST00000527887 MAP3K7O43318 606 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 METTL18O95568 372 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 GAS8O95995 478 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 PRKAR1AP10644 381 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 FOLR1P15328 257 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 ACRV1P26436 265 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 TUBB4BP68371 445 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 TMPRSS15P98073 1019 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 PLOD1Q02809 727 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-212ENST00000527887 CACNG1Q06432 222 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 SPARCL1Q14515 664 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 SERPINA9Q86WD7 417 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 SPDYE1Q8NFV5 336 aaPredicted RBP13.83□□□□□ -0.2
CAPN1-212ENST00000527887 CDKN2AIPNLQ96HQ2 116 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 ELMO2Q96JJ3 720 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 DNAJC1Q96KC8 554 aaKnown RBP13.83□□□□□ -0.2
CAPN1-212ENST00000527887 TFB2MQ9H5Q4 396 aaKnown RBP13.83□□□□□ -0.2
CAPN1-212ENST00000527887 MVB12BQ9H7P6 319 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 LHX9Q9NQ69 397 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 LATS2Q9NRM7 1088 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 C1GALT1Q9NS00 363 aa13.83□□□□□ -0.2
CAPN1-212ENST00000527887 MROH6A6NGR9 719 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 F8W8V4 182 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 POLBP06746 335 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 MSL3P1P0C860 447 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 F8A1P23610 371 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 OAS2P29728 719 aaKnown RBP13.82□□□□□ -0.2
CAPN1-212ENST00000527887 NSG1P42857 185 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 PPP1CAP62136 330 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 ITIH4Q14624 930 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 DEFB109BQ30KR1 87 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 ZRANB3Q5FWF4 1079 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 LYPLAL1Q5VWZ2 237 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 C16orf46Q6P387 395 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 TAS2R42Q7RTR8 314 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 TRIM58Q8NG06 486 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 C9orf43Q8TAL5 461 aaPredicted RBP13.82□□□□□ -0.2
CAPN1-212ENST00000527887 RMDN2Q96LZ7 410 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 LRFN5Q96NI6 719 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 TTC1Q99614 292 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 TMEM121Q9BTD3 319 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 FAM96AQ9H5X1 160 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 COG4Q9H9E3 785 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 FANCEQ9HB96 536 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 LZTFL1Q9NQ48 299 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 ANAPC2Q9UJX6 822 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 RIMKLBQ9ULI2 386 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 POLHQ9Y253 713 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 BTRCQ9Y297 605 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 MYO18BQ8IUG5 2567 aa13.82□□□□□ -0.2
CAPN1-212ENST00000527887 UBR5O95071 2799 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms