RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 SPATA31D4Q6ZUB0 917 aa15.08■□□□□ 0
USH1C-207ENST00000527720 HS6ST3Q8IZP7 471 aa15.08■□□□□ 0
USH1C-207ENST00000527720 MCCC1Q96RQ3 725 aaPredicted RBP15.08■□□□□ 0
USH1C-207ENST00000527720 TMEM79Q9BSE2 394 aa15.08■□□□□ 0
USH1C-207ENST00000527720 C9orf16Q9BUW7 83 aa15.08■□□□□ 0
USH1C-207ENST00000527720 ANKRD60Q9BZ19 345 aa15.08■□□□□ 0
USH1C-207ENST00000527720 PCDHGB4Q9UN71 923 aa15.08■□□□□ 0
USH1C-207ENST00000527720 CCL27Q9Y4X3 112 aa15.08■□□□□ 0
USH1C-207ENST00000527720 PCDHGB5Q9Y5G0 923 aa15.08■□□□□ 0
USH1C-207ENST00000527720 MYOFQ9NZM1 2061 aa15.08■□□□□ 0
USH1C-207ENST00000527720 TCRBV5S2A0A599 114 aa15.08■□□□□ 0
USH1C-207ENST00000527720 LEFTY2O00292 366 aa15.08■□□□□ 0
USH1C-207ENST00000527720 ARHGEF15O94989 841 aa15.08■□□□□ 0
USH1C-207ENST00000527720 PGM3O95394 542 aa15.08■□□□□ 0
USH1C-207ENST00000527720 GUCA1CO95843 209 aa15.08■□□□□ 0
USH1C-207ENST00000527720 G6PDP11413 515 aa15.08■□□□□ 0
USH1C-207ENST00000527720 WDR5P61964 334 aaKnown RBP15.08■□□□□ 0
USH1C-207ENST00000527720 GK3PQ14409 553 aa15.08■□□□□ 0
USH1C-207ENST00000527720 NHSL2Q5HYW2 709 aa15.08■□□□□ 0
USH1C-207ENST00000527720 TMCO2Q7Z6W1 182 aaPredicted RBP15.08■□□□□ 0
USH1C-207ENST00000527720 SATL1Q86VE3 508 aa15.08■□□□□ 0
USH1C-207ENST00000527720 GPR26Q8NDV2 337 aa15.08■□□□□ 0
USH1C-207ENST00000527720 TTC16Q8NEE8 873 aa15.08■□□□□ 0
USH1C-207ENST00000527720 NAT14Q8WUY8 206 aa15.08■□□□□ 0
USH1C-207ENST00000527720 VOPP1Q96AW1 172 aa15.08■□□□□ 0
USH1C-207ENST00000527720 ULK4Q96C45 1275 aa15.08■□□□□ 0
USH1C-207ENST00000527720 ASIC4Q96FT7 647 aa15.08■□□□□ 0
USH1C-207ENST00000527720 APOL5Q9BWW9 433 aa15.08■□□□□ 0
USH1C-207ENST00000527720 CEP44Q9C0F1 390 aa15.08■□□□□ 0
USH1C-207ENST00000527720 SUV39H2Q9H5I1 410 aa15.08■□□□□ 0
USH1C-207ENST00000527720 ASIC5Q9NY37 505 aa15.08■□□□□ 0
USH1C-207ENST00000527720 EIF3LQ9Y262 564 aaKnown RBP15.08■□□□□ 0
USH1C-207ENST00000527720 KATNA1O75449 491 aa15.07■□□□□ 0
USH1C-207ENST00000527720 PHKG1Q16816 387 aa15.07■□□□□ 0
USH1C-207ENST00000527720 CYP51A1Q16850 503 aa15.07■□□□□ 0
USH1C-207ENST00000527720 C22orf39Q6P5X5 142 aa15.07■□□□□ 0
USH1C-207ENST00000527720 IYDQ6PHW0 289 aa15.07■□□□□ 0
USH1C-207ENST00000527720 LILRA6Q6PI73 481 aa15.07■□□□□ 0
USH1C-207ENST00000527720 TRIM46Q7Z4K8 759 aa15.07■□□□□ 0
USH1C-207ENST00000527720 TSPAN33Q86UF1 283 aa15.07■□□□□ 0
USH1C-207ENST00000527720 TBC1D21Q8IYX1 336 aa15.07■□□□□ 0
USH1C-207ENST00000527720 SPDYE1Q8NFV5 336 aaPredicted RBP15.07■□□□□ 0
USH1C-207ENST00000527720 DGCR14Q96DF8 476 aaKnown RBP15.07■□□□□ 0
USH1C-207ENST00000527720 ZNF641Q96N77 438 aaPredicted RBP15.07■□□□□ 0
USH1C-207ENST00000527720 PRPF18Q99633 342 aaKnown RBP15.07■□□□□ 0
USH1C-207ENST00000527720 ACTL8Q9H568 366 aa15.07■□□□□ 0
USH1C-207ENST00000527720 PNPLA3Q9NST1 481 aa15.07■□□□□ 0
USH1C-207ENST00000527720 INTS7Q9NVH2 962 aaKnown RBP15.07■□□□□ 0
USH1C-207ENST00000527720 MAGEL2Q9UJ55 1249 aa15.07■□□□□ 0
USH1C-207ENST00000527720 TSR3Q9UJK0 312 aaKnown RBP15.07■□□□□ 0
USH1C-207ENST00000527720 POLR3HQ9Y535 204 aaPredicted RBP15.07■□□□□ 0
USH1C-207ENST00000527720 PCDHB3Q9Y5E6 796 aa15.07■□□□□ 0
USH1C-207ENST00000527720 SOCS2O14508 198 aa15.06■□□□□ 0
USH1C-207ENST00000527720 GRM6O15303 877 aa15.06■□□□□ 0
USH1C-207ENST00000527720 INPP4BO15327 924 aa15.06■□□□□ 0
USH1C-207ENST00000527720 CLTBP09497 229 aa15.06■□□□□ 0
USH1C-207ENST00000527720 EPB42P16452 691 aa15.06■□□□□ 0
USH1C-207ENST00000527720 CKMT2P17540 419 aa15.06■□□□□ 0
USH1C-207ENST00000527720 VARSP26640 1264 aaKnown RBP15.06■□□□□ 0
USH1C-207ENST00000527720 CASP2P42575 452 aa15.06■□□□□ 0
USH1C-207ENST00000527720 CCT8P50990 548 aa15.06■□□□□ 0
USH1C-207ENST00000527720 PWP1Q13610 501 aa15.06■□□□□ 0
USH1C-207ENST00000527720 FUT11Q495W5 492 aa15.06■□□□□ 0
USH1C-207ENST00000527720 TMTC4Q5T4D3 741 aa15.06■□□□□ 0
USH1C-207ENST00000527720 LRRC66Q68CR7 880 aa15.06■□□□□ 0
USH1C-207ENST00000527720 DLEU7Q6UYE1 221 aa15.06■□□□□ 0
USH1C-207ENST00000527720 AADATQ8N5Z0 425 aa15.06■□□□□ 0
USH1C-207ENST00000527720 GLB1L3Q8NCI6 653 aaPredicted RBP15.06■□□□□ 0
USH1C-207ENST00000527720 COPS8Q99627 209 aa15.06■□□□□ 0
USH1C-207ENST00000527720 HAUS8Q9BT25 410 aa15.06■□□□□ 0
USH1C-207ENST00000527720 SLC29A3Q9BZD2 475 aa15.06■□□□□ 0
USH1C-207ENST00000527720 TRIM4Q9C037 500 aa15.06■□□□□ 0
USH1C-207ENST00000527720 CRISPLD2Q9H0B8 497 aa15.06■□□□□ 0
USH1C-207ENST00000527720 DUS2Q9NX74 493 aaKnown RBP15.06■□□□□ 0
USH1C-207ENST00000527720 SLAMF8Q9P0V8 285 aa15.06■□□□□ 0
USH1C-207ENST00000527720 SLC25A13Q9UJS0 675 aa15.06■□□□□ 0
USH1C-207ENST00000527720 ANAPC2Q9UJX6 822 aa15.06■□□□□ 0
USH1C-207ENST00000527720 ATP11BQ9Y2G3 1177 aa15.06■□□□□ 0
USH1C-207ENST00000527720 RNF11Q9Y3C5 154 aa15.06■□□□□ 0
USH1C-207ENST00000527720 IGLV3-16A0A075B6K0 115 aa15.06■□□□□ 0
USH1C-207ENST00000527720 A0A1W2PRU2 124 aa15.06■□□□□ 0
USH1C-207ENST00000527720 POP4O95707 220 aaKnown RBP15.06■□□□□ 0
USH1C-207ENST00000527720 ANXA5P08758 320 aa15.06■□□□□ 0
USH1C-207ENST00000527720 OXTRP30559 389 aa15.06■□□□□ 0
USH1C-207ENST00000527720 NR1H2P55055 460 aa15.06■□□□□ 0
USH1C-207ENST00000527720 ATP6AP1Q15904 470 aa15.06■□□□□ 0
USH1C-207ENST00000527720 RFTN2Q52LD8 501 aaPredicted RBP15.06■□□□□ 0
USH1C-207ENST00000527720 SLC2A7Q6PXP3 512 aa15.06■□□□□ 0
USH1C-207ENST00000527720 IFNEQ86WN2 208 aa15.06■□□□□ 0
USH1C-207ENST00000527720 OR8J3Q8NGG0 315 aa15.06■□□□□ 0
USH1C-207ENST00000527720 TFAP2CQ92754 450 aa15.06■□□□□ 0
USH1C-207ENST00000527720 RPL10LQ96L21 214 aaKnown RBP15.06■□□□□ 0
USH1C-207ENST00000527720 TMEM74Q96NL1 305 aa15.06■□□□□ 0
USH1C-207ENST00000527720 ZBTB18Q99592 522 aa15.06■□□□□ 0
USH1C-207ENST00000527720 EMILIN2Q9BXX0 1053 aa15.06■□□□□ 0
USH1C-207ENST00000527720 VCX3AQ9NNX9 186 aa15.06■□□□□ 0
USH1C-207ENST00000527720 ZMYM5Q9UJ78 669 aa15.06■□□□□ 0
USH1C-207ENST00000527720 CROCCQ5TZA2 2017 aa15.06■□□□□ 0
USH1C-207ENST00000527720 ULK1O75385 1050 aa15.05■□□□□ 0
USH1C-207ENST00000527720 STK16O75716 305 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms