RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RPS18P62269 152 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 XIAPP98170 497 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 SPARCL1Q14515 664 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 CAPRIN2Q6IMN6 1127 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 ZNF449Q6P9G9 518 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 LILRA3Q8N6C8 439 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 OR8K5Q8NH50 307 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 HEXDCQ8WVB3 486 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 LCN9Q8WX39 176 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 LINC00615Q96LM1 132 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 RMDN2Q96LZ7 410 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 PPP1R2P1Q96PQ5 205 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 TBL1YQ9BQ87 522 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 SRMSQ9H3Y6 488 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 PLAAQ9Y263 795 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 FARSAQ9Y285 508 aaKnown RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 EPN1Q9Y6I3 576 aaPredicted RBP21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 DOPEY2Q9Y3R5 2298 aa21.8■■□□□ 1.08
TRAPPC4-208ENST00000527680 UBR5O95071 2799 aaPredicted RBP21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 GSAPA4D1B5 854 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 MAP3K7O43318 606 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 TJP3O95049 919 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 RWDD2BP57060 319 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 SEMA5AQ13591 1074 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 SNX20Q7Z614 316 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 NXPE1Q8N323 547 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 HM13Q8TCT9 377 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 THAP4Q8WY91 577 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 CALR3Q96L12 384 aaKnown RBP21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 PPM1MQ96MI6 270 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 SPATA13Q96N96 652 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 FANCEQ9HB96 536 aa21.79■■□□□ 1.08
TRAPPC4-208ENST00000527680 SLC9B1P1A6NJY1 282 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 IFRD1O00458 451 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 CCL22O00626 93 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 PJA2O43164 708 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 SGTAO43765 313 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 DNAJB5O75953 348 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 MLLT10P55197 1068 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 ZRANB3Q5FWF4 1079 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 SARM1Q6SZW1 724 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 TAS2R42Q7RTR8 314 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 SYVN1Q86TM6 617 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 CARFQ8N187 725 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 ACVR1CQ8NER5 493 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 ZNF501Q96CX3 271 aaPredicted RBP21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 CLIP3Q96DZ5 547 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 TLR10Q9BXR5 811 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 DUSP10Q9Y6W6 482 aa21.78■■□□□ 1.08
TRAPPC4-208ENST00000527680 C17orf113A0A1B0GUU1 675 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 MC4RP32245 332 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 PRLHRP49683 370 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 CCL11P51671 97 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 GPS2Q13227 327 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 UGT8Q16880 541 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 GPR33Q49SQ1 333 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 ATCAYQ86WG3 371 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 APLFQ8IW19 511 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 PHC3Q8NDX5 983 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 CPT1BQ92523 772 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 TRIM55Q9BYV6 548 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 SLC7A5P2Q9GIP4 190 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 VPS37BQ9H9H4 285 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 ACSS2Q9NR19 701 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 C1GALT1Q9NS00 363 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 FEZ2Q9UHY8 353 aaPredicted RBP21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 SPTBP11277 2137 aa21.77■■□□□ 1.08
TRAPPC4-208ENST00000527680 SOWAHDA6NJG2 315 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 AGAP14A8MT82 685 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 MATN2O00339 956 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 TPH1P17752 444 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 PREPP48147 710 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 ZNF140P52738 457 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 GSDMDP57764 484 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 MSLNQ13421 630 aaPredicted RBP21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 PRAMEF17Q5VTA0 474 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 AADACL2Q6P093 401 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 ARHGEF18Q6ZSZ5 1173 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 ALS2CR12Q96Q35 445 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 CHST8Q9H2A9 424 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 ZDHHC3Q9NYG2 299 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 ANKMY1Q9P2S6 941 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 BTRCQ9Y297 605 aa21.76■■□□□ 1.07
TRAPPC4-208ENST00000527680 RCCD1A6NED2 376 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 ARGFXA6NJG6 315 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 MEN1O00255 615 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 PRDX3P30048 256 aaKnown RBP21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 PTPN7P35236 360 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 CDKN1CP49918 316 aaPredicted RBP21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 CHAF1BQ13112 559 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 DENND5AQ6IQ26 1287 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 TMTC1Q8IUR5 882 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 SLC38A9Q8NBW4 561 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 DNAJC1Q96KC8 554 aaKnown RBP21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 SLC25A23Q9BV35 468 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 COG4Q9H9E3 785 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 ARNT2Q9HBZ2 717 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 SERTAD3Q9UJW9 196 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 POMT2Q9UKY4 750 aa21.75■■□□□ 1.07
TRAPPC4-208ENST00000527680 SNX7Q9UNH6 387 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms