RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 ZC3H18Q86VM9 953 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 OOSP2Q86WS3 158 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CCDC50Q8IVM0 306 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 LRRC8AQ8IWT6 810 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 RBM12BQ8IXT5 1001 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 RAVER1Q8IY67 606 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 DSELQ8IZU8 1212 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SLC35G2Q8TBE7 412 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 BRSK1Q8TDC3 778 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 CPT1BQ92523 772 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 FATE1Q969F0 183 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 FAF2Q96CS3 445 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SGSM3Q96HU1 749 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 RMDN2Q96LZ7 410 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 FCRL4Q96PJ5 515 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 APOL2Q9BQE5 337 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 TUBB2BQ9BVA1 445 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SPRTNQ9H040 489 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 RAB33BQ9H082 229 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 ACTR5Q9H9F9 607 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 ZBTB20Q9HC78 741 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 MLXIPLQ9NP71 852 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 GPR83Q9NYM4 423 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 IL17CQ9P0M4 197 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SEMA5BQ9P283 1151 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 UVRAGQ9P2Y5 699 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 FAM153AQ9UHL3 310 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 SLC24A2Q9UI40 661 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 NENFQ9UMX5 172 aa6.4□□□□□ -1.38
CD44-221ENST00000526000 G3BP2Q9UN86 482 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 PCDHGA9Q9Y5G4 932 aaKnown RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 EPN1Q9Y6I3 576 aaPredicted RBP6.4□□□□□ -1.38
CD44-221ENST00000526000 MDC1Q14676 2089 aaKnown RBP6.4□□□□□ -1.39
CD44-221ENST00000526000 A0A0A6YYK5 440 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 ARHGAP10A1A4S6 786 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 ANKUB1A6NFN9 424 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 MGAT4DA6NG13 374 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 C3orf70A6NLC5 250 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 ENO4A6NNW6 628 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 BTNL10A8MVZ5 291 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 GPR89AB7ZAQ6 455 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 GAPDHSO14556 408 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 ZNF749O43361 778 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 HCRTR1O43613 425 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 CAPN1P07384 714 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 TMEM253P0C7T8 217 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 GPR89BP0CG08 455 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 PECAM1P16284 738 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 HLA-DPA1P20036 260 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 PRDX3P30048 256 aaKnown RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 VAV2P52735 878 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SRSF11Q05519 484 aaKnown RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 WASHC5Q12768 1159 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 PRKAA1Q13131 559 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 ELOAQ14241 798 aaKnown RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 SPARCL1Q14515 664 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 BRD3Q15059 726 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 HIF1AQ16665 826 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 LONRF2Q1L5Z9 754 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 DEFB110Q30KQ9 67 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 LDLRAP1Q5SW96 308 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 PDPK2PQ6A1A2 396 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SLC9A4Q6AI14 798 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 CYB5D1Q6P9G0 228 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 KDELC1Q6UW63 502 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 FAM198BQ6UWH4 519 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 NAPRTQ6XQN6 538 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 ZNF662Q6ZS27 426 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 GLT6D1Q7Z4J2 308 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 BPHLQ86WA6 291 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 TMEM139Q8IV31 216 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 RHOT2Q8IXI1 618 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 FAM20CQ8IXL6 584 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SYTL1Q8IYJ3 562 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 LMNTD1Q8N9Z9 388 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 OR4K2Q8NGD2 314 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 ADAMTS17Q8TE56 1095 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 LCN9Q8WX39 176 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 CTNNBL1Q8WYA6 563 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 N4BP2L2Q92802 583 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 TADA1Q96BN2 335 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 OXNAD1Q96HP4 312 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 RBM41Q96IZ5 413 aaKnown RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 MRGPRX2Q96LB1 330 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 TEKT5Q96M29 485 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 VPS35Q96QK1 796 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 CHP1Q99653 195 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 FICDQ9BVA6 458 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 NLNQ9BYT8 704 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SLC29A3Q9BZD2 475 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 TSGA10Q9BZW7 698 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SRMSQ9H3Y6 488 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 ASB8Q9H765 288 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 PCMTD2Q9NV79 361 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 CUEDC1Q9NWM3 386 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 IRAK4Q9NWZ3 460 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 KLHL8Q9P2G9 620 aaPredicted RBP6.39□□□□□ -1.39
CD44-221ENST00000526000 FKBPLQ9UIM3 349 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 SERTAD3Q9UJW9 196 aa6.39□□□□□ -1.39
CD44-221ENST00000526000 NTNG1Q9Y2I2 539 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms