RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 MFAP4P55083 255 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 PRKCZQ05513 592 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 SPOCK1Q08629 439 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 TEAD2Q15562 447 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 TMEM198Q66K66 360 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 KIAA0930Q6ICG6 404 aaPredicted RBP2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 TMCO3Q6UWJ1 677 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 C4orf50Q6ZRC1 276 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 LSMEM2Q8N112 164 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 TTC39CQ8N584 583 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 MCUQ8NE86 351 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 DBF4BQ8NFT6 615 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 TBC1D16Q8TBP0 767 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 DAZLQ92904 295 aaKnown RBP2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 GMPPAQ96IJ6 420 aaPredicted RBP2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 SGK494Q96LW2 274 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 CEP295NLQ96MC4 621 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 MYADMQ96S97 322 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 RTP3Q9BQQ7 232 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 TRAF4Q9BUZ4 470 aaPredicted RBP2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 HRH4Q9H3N8 390 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 ERVMER34-1Q9H9K5 563 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 SEPT11Q9NVA2 429 aaKnown RBP2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 GRIP1Q9Y3R0 1128 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 SPIN1Q9Y657 262 aaPredicted RBP2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 RNF215Q9Y6U7 377 aa2.46□□□□□ -2.02
CLNS1A-203ENST00000525359 ITIH6Q6UXX5 1313 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 IGHV4-4A0A075B6R2 117 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 A0A087WW49 117 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 A0A1W2PN81 502 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 MEIOCA2RUB1 952 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 B4DLN1 442 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 MITFO75030 526 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 PRKRAO75569 313 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 TRMUO75648 421 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 PIGNO95427 931 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 TRIM49P0CI25 452 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 TRIM49CP0CI26 452 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ZNF26P17031 533 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 TYMPP19971 482 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 SLC6A6P31641 620 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 CHRNA7P36544 502 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 PSMB10P40306 273 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 MRPL12P52815 198 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 PDX1P52945 283 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 CLNS1AP54105 237 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 CDR2Q01850 454 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 LGALS3BPQ08380 585 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 TMEM187Q14656 261 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 NR1D2Q14995 579 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 SGSM1Q2NKQ1 1148 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 FAM98BQ52LJ0 330 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 CORO6Q6QEF8 472 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 METTL7BQ6UX53 244 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ZNF497Q6ZNH5 498 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 RPAP2Q8IXW5 612 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 CRYBG2Q8N1P7 616 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 RAB42Q8N4Z0 105 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ZNF611Q8N823 705 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 NIPA2Q8N8Q9 360 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 PAPD5Q8NDF8 572 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 OR1J1Q8NGS3 322 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ZNF653Q96CK0 615 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 SENP5Q96HI0 755 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 MAGED4Q96JG8 741 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ZNF582Q96NG8 517 aaPredicted RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ZNF599Q96NL3 588 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 SLC22A12Q96S37 553 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 TRIM15Q9C019 465 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 P2RY12Q9H244 342 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 OSGEPL1Q9H4B0 414 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 ATAD3AQ9NVI7 634 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 BARHL2Q9NY43 387 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 PSD3Q9NYI0 1048 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 NPAP1Q9NZP6 1156 aa2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 EXOGQ9Y2C4 368 aaKnown RBP2.45□□□□□ -2.02
CLNS1A-203ENST00000525359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP2.45□□□□□ -2.024e-14■■□□□ 12.6
CLNS1A-203ENST00000525359 RUSC2Q8N2Y8 1516 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 NOTCH3Q9UM47 2321 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 LOC100509620A0A075B734 347 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 IGLV9-49A0A0B4J1Y8 123 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 A0A0J9YWU9 116 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 DNM1LO00429 736 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 KLF11O14901 512 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 ATP6V0E1O15342 81 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 IPO8O15397 1037 aaKnown RBP2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 USO1O60763 962 aaKnown RBP2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 PRAMEF11O60813 436 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 TSPAN9O75954 239 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 OR2C1O95371 312 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 GCNT3O95395 438 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 DPEP1P16444 411 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 WNT5AP41221 380 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 CLK1P49759 484 aaKnown RBP2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 HERV-K104P61576 105 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 DCAF7P61962 342 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 SIRPAP78324 504 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 GPR17Q13304 367 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 MELKQ14680 651 aa2.44□□□□□ -2.02
CLNS1A-203ENST00000525359 DLG2Q15700 870 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms