RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 SLC1A1P43005 524 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 ADCY2Q08462 1091 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 MPP3Q13368 585 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 TAZQ16635 292 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 SPOCD1Q6ZMY3 1216 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 LILRA3Q8N6C8 439 aaPredicted RBP23.3■■□□□ 1.32
USP47-205ENST00000525257 Q8NA96 180 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 CHP1Q99653 195 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 NLNQ9BYT8 704 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 ASB8Q9H765 288 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 SLAMF7Q9NQ25 335 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 CASS4Q9NQ75 786 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 ZNHIT6Q9NWK9 470 aaKnown RBP23.3■■□□□ 1.32
USP47-205ENST00000525257 RSPH14Q9UHP6 348 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 G3BP2Q9UN86 482 aaKnown RBP23.3■■□□□ 1.32
USP47-205ENST00000525257 PCDHGB7Q9Y5F8 929 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 COLEC10Q9Y6Z7 277 aa23.3■■□□□ 1.32
USP47-205ENST00000525257 GSAPA4D1B5 854 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 TCP11X1B4DZS4 312 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 TMEM150CB9EJG8 249 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 COMTP21964 271 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 RORAP35398 523 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 VAV2P52735 878 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 ITGA1P56199 1179 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 MRPL49Q13405 166 aaKnown RBP23.29■■□□□ 1.32
USP47-205ENST00000525257 EIF2S3LQ2VIR3 472 aaKnown RBP23.29■■□□□ 1.32
USP47-205ENST00000525257 BCL7AQ4VC05 210 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 FAM198BQ6UWH4 519 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 SYTL1Q8IYJ3 562 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 CFAP206Q8IYR0 622 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 OR1L3Q8NH93 324 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 P3H4Q92791 437 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 ACTR5Q9H9F9 607 aaPredicted RBP23.29■■□□□ 1.32
USP47-205ENST00000525257 C1GALT1Q9NS00 363 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 PCMTD2Q9NV79 361 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 FKBPLQ9UIM3 349 aa23.29■■□□□ 1.32
USP47-205ENST00000525257 ITPR2Q14571 2701 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 HIVEP3Q5T1R4 2406 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 AGTP01019 485 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 CAPN1P07384 714 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 CYP2A7P20853 494 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 NDUFS1P28331 727 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 PTCHD3Q3KNS1 767 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 SLC6A19Q695T7 634 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 OR4K2Q8NGD2 314 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 QKIQ96PU8 341 aaKnown RBP eCLIP23.28■■□□□ 1.32
USP47-205ENST00000525257 VAT1Q99536 393 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 ANP32EQ9BTT0 268 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 FICDQ9BVA6 458 aa23.28■■□□□ 1.32
USP47-205ENST00000525257 CUEDC1Q9NWM3 386 aaPredicted RBP23.28■■□□□ 1.32
USP47-205ENST00000525257 KLHL33A6NCF5 533 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 SGTAO43765 313 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 SRP72O76094 671 aaKnown RBP23.27■■□□□ 1.32
USP47-205ENST00000525257 TPM3P06753 285 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 PREPP48147 710 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 RAPSNQ13702 412 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 ZNF789Q5FWF6 425 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 ZBTB2Q8N680 514 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 RBMXL3Q8N7X1 1067 aaKnown RBP23.27■■□□□ 1.32
USP47-205ENST00000525257 LCN9Q8WX39 176 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 LINC00615Q96LM1 132 aaPredicted RBP23.27■■□□□ 1.32
USP47-205ENST00000525257 CCDC42Q96M95 316 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 NRTNQ99748 197 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 SRMSQ9H3Y6 488 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 NHEJ1Q9H9Q4 299 aaPredicted RBP23.27■■□□□ 1.32
USP47-205ENST00000525257 GPR83Q9NYM4 423 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 HEBP2Q9Y5Z4 205 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 PCSK5Q92824 1860 aa23.27■■□□□ 1.32
USP47-205ENST00000525257 C2orf81A6NN90 581 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 PYGMP11217 842 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 ST6GAL1P15907 406 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 LMAN1P49257 510 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 ATP1A4Q13733 1029 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 TMEM102Q8N9M5 508 aaPredicted RBP23.26■■□□□ 1.31
USP47-205ENST00000525257 ACVR1CQ8NER5 493 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 PRR7Q8TB68 274 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 HM13Q8TCT9 377 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 DCUN1D1Q96GG9 259 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 FERD3LQ96RJ6 166 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 SLC29A3Q9BZD2 475 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 SLC7A5P2Q9GIP4 190 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 KLHL25Q9H0H3 589 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 ABHD10Q9NUJ1 306 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 CRLS1Q9UJA2 301 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 TRHDEQ9UKU6 1024 aa23.26■■□□□ 1.31
USP47-205ENST00000525257 hCG_1818297A0A087WSY0 165 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 MATN2O00339 956 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 PSTPIP1O43586 416 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 PRDX3P30048 256 aaKnown RBP23.25■■□□□ 1.31
USP47-205ENST00000525257 RRADP55042 308 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 OLIG2Q13516 323 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 TRIM14Q14142 442 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 NCF4Q15080 339 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 TAF1AQ15573 450 aaPredicted RBP23.25■■□□□ 1.31
USP47-205ENST00000525257 TFDP3Q5H9I0 405 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 MED25Q71SY5 747 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 HPS6Q86YV9 775 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 GLIS1Q8NBF1 620 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 PNPLA2Q96AD5 504 aa23.25■■□□□ 1.31
USP47-205ENST00000525257 APOL2Q9BQE5 337 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms