RNA–Protein interactions for RNA: ENST00000525045.5

PABPC4-219, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 2

Gene PABPC4, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-219	ENST00000525045	DEF6	Q9H4E7	631 aa		13.73	□□□□□ -0.21
PABPC4-219	ENST00000525045	POMT2	Q9UKY4	750 aa		13.73	□□□□□ -0.21
PABPC4-219	ENST00000525045	SLC5A6	Q9Y289	635 aa		13.73	□□□□□ -0.21
PABPC4-219	ENST00000525045	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.73	□□□□□ -0.21	6e-13	■■□□□ 12.7
PABPC4-219	ENST00000525045	C2orf81	A6NN90	581 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045		E7EQ34	232 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	IPO13	O94829	963 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	KRT1	P04264	644 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	ALPP	P05187	535 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	HNRNPH3	P31942	346 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	SLC1A1	P43005	524 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	ITGA1	P56199	1179 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	DYNLT1	P63172	113 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	MRPL49	Q13405	166 aa	Known RBP	13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	SSPN	Q14714	243 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	NCF4	Q15080	339 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	PRKD1	Q15139	912 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	BCL7A	Q4VC05	210 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	LYPLAL1	Q5VWZ2	237 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	LCN10	Q6JVE6	187 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	ZNF449	Q6P9G9	518 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	RHOT2	Q8IXI1	618 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	CFAP206	Q8IYR0	622 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	GPR135	Q8IZ08	494 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	HEXDC	Q8WVB3	486 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	LCN9	Q8WX39	176 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	TM9SF4	Q92544	642 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	RNF25	Q96BH1	459 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	DCUN1D1	Q96GG9	259 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	MRGPRX2	Q96LB1	330 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	C5orf34	Q96MH7	638 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	PCMTD2	Q9NV79	361 aa		13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.72	□□□□□ -0.21
PABPC4-219	ENST00000525045	UTP20	O75691	2785 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	C17orf113	A0A1B0GUU1	675 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	GSAP	A4D1B5	854 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	PEX12	O00623	359 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	CBX6	O95503	412 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	PRAMEF1	O95521	474 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	LDLR	P01130	860 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	POLB	P06746	335 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	CAPN1	P07384	714 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	NFKB1	P19838	968 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	PRDX3	P30048	256 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	CD68	P34810	354 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	ANP32A	P39687	249 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	ABR	Q12979	859 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	NR6A1	Q15406	480 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	PRR30	Q53SZ7	412 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	ZRANB3	Q5FWF4	1079 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	FAM182A	Q5T1J6	154 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	PRAMEF17	Q5VTA0	474 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	FAM198B	Q6UWH4	519 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	DET1	Q7L5Y6	550 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	HOOK3	Q86VS8	718 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	TTC13	Q8NBP0	860 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	CLEC1A	Q8NC01	280 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	OR1L3	Q8NH93	324 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	HM13	Q8TCT9	377 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	P3H4	Q92791	437 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	N4BP2L2	Q92802	583 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	SNRNP40	Q96DI7	357 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	FERD3L	Q96RJ6	166 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	FSD1L	Q9BXM9	530 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	PACSIN1	Q9BY11	444 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	ASB8	Q9H765	288 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	ZNHIT6	Q9NWK9	470 aa	Known RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	LUZP4	Q9P127	313 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	GPN3	Q9UHW5	284 aa	Predicted RBP	13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	TRHDE	Q9UKU6	1024 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	B3GNT3	Q9Y2A9	372 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	AP1M2	Q9Y6Q5	423 aa		13.71	□□□□□ -0.21
PABPC4-219	ENST00000525045	C5orf60	A6NFR6	353 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	CFAP99	D6REC4	459 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	IFRD1	O00458	451 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	GAPDHS	O14556	408 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	BUD23	O43709	281 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	AKR1B10	O60218	316 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	GYPC	P04921	128 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	TPM3	P06753	285 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	RNF224	P0DH78	156 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	CHRNA4	P43681	627 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	ARCN1	P48444	511 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	CD151	P48509	253 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	WASHC5	Q12768	1159 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	ATP1A4	Q13733	1029 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	NOMO1	Q15155	1222 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	TAF1A	Q15573	450 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	KYNU	Q16719	465 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	DUS1L	Q6P1R4	473 aa	Known RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	FBXO38	Q6PIJ6	1188 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	SARM1	Q6SZW1	724 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	IGFL3	Q6UXB1	125 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	B4GALNT4	Q76KP1	1039 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	SLC34A3	Q8N130	599 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	IPMK	Q8NFU5	416 aa		13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PABPC4-219	ENST00000525045	ULK4	Q96C45	1275 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms