RNA–Protein interactions for RNA: ENST00000523628.5

HDAC2-216, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-216ENST00000523628 ZNF419Q96HQ0 510 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-216ENST00000523628 PPP1R16AQ96I34 528 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 ZFYVE19Q96K21 471 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 BTN2A3PQ96KV6 586 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 EIF3CQ99613 913 aaKnown RBP4.29□□□□□ -1.72
HDAC2-216ENST00000523628 NCAPGQ9BPX3 1015 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 MRPL45Q9BRJ2 306 aaKnown RBP4.29□□□□□ -1.72
HDAC2-216ENST00000523628 ANP32EQ9BTT0 268 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 TMEM120AQ9BXJ8 343 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-216ENST00000523628 ARRDC1-AS1Q9H2J1 176 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 PRDM16Q9HAZ2 1276 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 CASS4Q9NQ75 786 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 CISHQ9NSE2 258 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 TMLHEQ9NVH6 421 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 FOXJ2Q9P0K8 574 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 LRFN1Q9P244 771 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 THAP10Q9P2Z0 257 aaPredicted RBP4.29□□□□□ -1.72
HDAC2-216ENST00000523628 PILRBQ9UKJ0 227 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 STAP1Q9ULZ2 295 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 PCDHGA1Q9Y5H4 931 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 NUP205Q92621 2012 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 NCOR2Q9Y618 2525 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 FAM208BQ5VWN6 2430 aa4.29□□□□□ -1.72
HDAC2-216ENST00000523628 CACNA1EQ15878 2313 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 LNP1A1A4G5 178 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FAM90A18PA6NE21 464 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FAM90A16PA6NEW6 464 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FAM90A9PA6NNJ1 464 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FAM90A5PA8MXJ8 464 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 TISP43B9A030 160 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 CAPN9O14815 690 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ZW10O43264 779 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 HSF2BPO75031 334 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 SKAP2O75563 359 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 INMTO95050 263 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 KCNK5O95279 499 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 LSM8O95777 96 aaKnown RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 AFPP02771 609 aaKnown RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ANXA6P08133 673 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FAM90A15PP0C7V4 464 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FAM90A14PP0C7W9 464 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ARSAP15289 507 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 CCR1P32246 355 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 HOXD13P35453 343 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FOLR3P41439 243 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 MATKP42679 507 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 DHPSP49366 369 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 TKTL1P51854 596 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 NDUFA8P51970 172 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 AIF1P55008 147 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 NXPH1P58417 271 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 KRT83P78385 493 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 PSG6Q00889 435 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ZNF33AQ06730 810 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 SLC20A2Q08357 652 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 FOXO1Q12778 655 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 SEMA3BQ13214 749 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 CDH18Q13634 790 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ELAVL3Q14576 367 aaKnown RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ZNF169Q14929 603 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ACOX1Q15067 660 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 BRMS1LQ5PSV4 323 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ZNF776Q68DI1 518 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 MRNIPQ6NTE8 343 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 TSSK4Q6SA08 328 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 SCARA5Q6ZMJ2 495 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 Q6ZNX1 250 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ACOT1Q86TX2 421 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 CAND1Q86VP6 1230 aaKnown RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ZNF677Q86XU0 584 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ALLCQ8N6M5 410 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 MLKLQ8NB16 471 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 MYRIPQ8NFW9 859 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 OR2T3Q8NH03 318 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 MBD3L2Q8NHZ7 208 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 LRRC15Q8TF66 581 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 DDI1Q8WTU0 396 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 HMGB4Q8WW32 186 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 IGSF8Q969P0 613 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 RSPRY1Q96DX4 576 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 TMA16Q96EY4 203 aaKnown RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 SIPA1Q96FS4 1042 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 HIST1H2AAQ96QV6 131 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 PRR25Q96S07 402 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 PANK2Q9BZ23 570 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 BLZF1Q9H2G9 400 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 THAP9Q9H5L6 903 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 SMYD3Q9H7B4 428 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ERVMER34-1Q9H9K5 563 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 POPDC2Q9HBU9 364 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 KLC4Q9NSK0 619 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 TBCCD1Q9NVR7 557 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 ELOVL2Q9NXB9 296 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 LCMT1Q9UIC8 334 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 CNTN6Q9UQ52 1028 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 CHD8Q9HCK8 2581 aa4.28□□□□□ -1.72
HDAC2-216ENST00000523628 COL5A1P20908 1838 aaPredicted RBP4.28□□□□□ -1.72
HDAC2-216ENST00000523628 DMDP11532 3685 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms