RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 MAMDC2Q7Z304 686 aaPredicted RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 DAAM2Q86T65 1068 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 CISD2Q8N5K1 135 aaKnown RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 OR2L2Q8NH16 312 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 OXNAD1Q96HP4 312 aaPredicted RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 MRGPRX2Q96LB1 330 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 NRTNQ99748 197 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 LATS2Q9NRM7 1088 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 ERRFI1Q9UJM3 462 aaPredicted RBP25.21■■□□□ 1.63
PVT1-219ENST00000523427 ACSL5Q9ULC5 683 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 COLEC10Q9Y6Z7 277 aa25.21■■□□□ 1.63
PVT1-219ENST00000523427 PRAMEF1O95521 474 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 PECAM1P16284 738 aaPredicted RBP25.2■■□□□ 1.62
PVT1-219ENST00000523427 RORAP35398 523 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 LMAN1P49257 510 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 SLC1A5Q15758 541 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 SLC18A3Q16572 532 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 PLEKHN1Q494U1 663 aaPredicted RBP25.2■■□□□ 1.62
PVT1-219ENST00000523427 FAM198BQ6UWH4 519 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 MED25Q71SY5 747 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 ZC3H18Q86VM9 953 aaKnown RBP25.2■■□□□ 1.62
PVT1-219ENST00000523427 TMEM102Q8N9M5 508 aaPredicted RBP25.2■■□□□ 1.62
PVT1-219ENST00000523427 DTX3LQ8TDB6 740 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 TCTN2Q96GX1 697 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 SGSM3Q96HU1 749 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 ASF1BQ9NVP2 202 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 POMT2Q9UKY4 750 aa25.2■■□□□ 1.62
PVT1-219ENST00000523427 ENO4A6NNW6 628 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 CLDN1O95832 211 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 CAPN1P07384 714 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 TMEM253P0C7T8 217 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 ANP32AP39687 249 aaKnown RBP25.19■■□□□ 1.62
PVT1-219ENST00000523427 RRADP55042 308 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 ZFPM2Q8WW38 1151 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 LCN9Q8WX39 176 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 HAUS1Q96CS2 278 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 SNRNP40Q96DI7 357 aaKnown RBP25.19■■□□□ 1.62
PVT1-219ENST00000523427 FERD3LQ96RJ6 166 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 SRMSQ9H3Y6 488 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 ASB8Q9H765 288 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 C1GALT1Q9NS00 363 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 ARL5AQ9Y689 179 aa25.19■■□□□ 1.62
PVT1-219ENST00000523427 MAP3K7O43318 606 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 CST8O60676 142 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 EPOP01588 193 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 PVRP15151 417 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 ST6GAL1P15907 406 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 VARSP26640 1264 aaKnown RBP25.18■■□□□ 1.62
PVT1-219ENST00000523427 DCTP40126 519 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 NCF4Q15080 339 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 BZW1Q7L1Q6 419 aaKnown RBP25.18■■□□□ 1.62
PVT1-219ENST00000523427 VSIG1Q86XK7 387 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 ZNF567Q8N184 647 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 CARFQ8N187 725 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 GLIS1Q8NBF1 620 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 IQCDQ96DY2 449 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 FSD1LQ9BXM9 530 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 SMOXQ9NWM0 555 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 IFNKQ9P0W0 207 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 SERTAD3Q9UJW9 196 aa25.18■■□□□ 1.62
PVT1-219ENST00000523427 DOPEY1Q5JWR5 2465 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 C9J4A7 227 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 LDB2O43679 373 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 AKR1B10O60218 316 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 NDUFS1P28331 727 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 PRDX3P30048 256 aaKnown RBP25.17■■□□□ 1.62
PVT1-219ENST00000523427 ZNF789Q5FWF6 425 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 MLIPQ5VWP3 458 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 RAB43Q86YS6 212 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 HPS6Q86YV9 775 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 IQCKQ8N0W5 287 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 DCUN1D1Q96GG9 259 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 SMAD5Q99717 465 aaKnown RBP25.17■■□□□ 1.62
PVT1-219ENST00000523427 FKBPLQ9UIM3 349 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 SEC16AO15027 2179 aa25.17■■□□□ 1.62
PVT1-219ENST00000523427 BTN3A3O00478 584 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 ZNF749O43361 778 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 AGTP01019 485 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 AGXTP21549 392 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 NR2C2P49116 596 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 ADCY2Q08462 1091 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 PHC3Q8NDX5 983 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 ACVR1CQ8NER5 493 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 OR4K2Q8NGD2 314 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 FCRL5Q96RD9 977 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 FICDQ9BVA6 458 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 FAM96AQ9H5X1 160 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 DDX56Q9NY93 547 aaKnown RBP25.16■■□□□ 1.62
PVT1-219ENST00000523427 RSPH14Q9UHP6 348 aa25.16■■□□□ 1.62
PVT1-219ENST00000523427 CCDC66A2RUB6 948 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 E7EQ34 232 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 BTN3A1O00481 513 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 LDLRP01130 860 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 HNRNPH3P31942 346 aaKnown RBP25.15■■□□□ 1.62
PVT1-219ENST00000523427 ARHGAP25P42331 645 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 TFDP2Q14188 446 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 C1orf189Q5VU69 101 aa25.15■■□□□ 1.62
PVT1-219ENST00000523427 N4BP2L2Q92802 583 aaPredicted RBP25.15■■□□□ 1.62
PVT1-219ENST00000523427 RBM41Q96IZ5 413 aaKnown RBP25.15■■□□□ 1.62
PVT1-219ENST00000523427 XKR8Q9H6D3 395 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms