RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 ZFP42Q96MM3 310 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 PRRG3Q9BZD7 231 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 ADPRHL2Q9NX46 363 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 CAPN15O75808 1086 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 LCKP06239 509 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 ADCYAP1R1P41586 468 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 KCNC1P48547 511 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 TUBA1BP68363 451 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 CREB5Q02930 508 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 SELENBP1Q13228 472 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 DDX39BQ13838 428 aaKnown RBP8.89□□□□□ -0.99
CSMD1-212ENST00000523387 ADPRMQ3LIE5 342 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 KANK2Q63ZY3 851 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 PPP2R2DQ66LE6 453 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 TUBA1AQ71U36 451 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 TMEM151AQ8N4L1 468 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 RHOXF1Q8NHV9 184 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 TSSK3Q96PN8 268 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 SLC2A13Q96QE2 648 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 CINPQ9BW66 212 aaPredicted RBP8.89□□□□□ -0.99
CSMD1-212ENST00000523387 MRM3Q9HC36 420 aaKnown RBP8.89□□□□□ -0.99
CSMD1-212ENST00000523387 C14orf119Q9NWQ9 140 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 OPTCQ9UBM4 332 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 MOSPD1Q9UJG1 213 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 SAMD4AQ9UPU9 718 aaKnown RBP8.89□□□□□ -0.99
CSMD1-212ENST00000523387 RNF6Q9Y252 685 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 TNPO3Q9Y5L0 923 aaKnown RBP8.89□□□□□ -0.99
CSMD1-212ENST00000523387 GPR45Q9Y5Y3 372 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 FAM172BPA6NC97 362 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 GABRDO14764 452 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 CREG1O75629 220 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 S1PR4O95977 384 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 OTCP00480 354 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 OR1E1P30953 314 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 PIGAP37287 484 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 DCTP40126 519 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 COL24A1Q17RW2 1714 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 KRT73Q86Y46 540 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 MTMR14Q8NCE2 650 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 PSD4Q8NDX1 1056 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 OR4K2Q8NGD2 314 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 CSF3RQ99062 836 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 NFKBIZQ9BYH8 718 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 GPR63Q9BZJ6 419 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 OR2B2Q9GZK3 357 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 ELOVL6Q9H5J4 265 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 SP140LQ9H930 580 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 PCDHGA3Q9Y5H0 932 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 NOX1Q9Y5S8 564 aa8.89□□□□□ -0.99
CSMD1-212ENST00000523387 ZNFX1Q9P2E3 1918 aaKnown RBP8.89□□□□□ -0.99
CSMD1-212ENST00000523387 ANKRD34BA5PLL1 514 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 E9PAM4 449 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 DLGAP1O14490 977 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 GUCY1B2O75343 617 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 KRT6AP02538 564 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 KRT6BP04259 564 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 FGF1P05230 155 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 THP07101 528 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 FGF4P08620 206 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 ODC1P11926 461 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 GGT1P19440 569 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 AXLP30530 894 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 NUDT6P53370 316 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 SLC10A7Q0GE19 358 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 IL18R1Q13478 541 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 BRMS1LQ5PSV4 323 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 ATP6V0D2Q8N8Y2 350 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 KCTD13Q8WZ19 329 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 SLC38A4Q969I6 547 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CDK5RAP1Q96SZ6 601 aaKnown RBP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 MYOCQ99972 504 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CLPBQ9H078 707 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 TRIT1Q9H3H1 467 aaKnown RBP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 WDR6Q9NNW5 1121 aaKnown RBP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 BPIFA1Q9NP55 256 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CCDC177Q9NQR7 707 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 IL37Q9NZH6 218 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 PIM2Q9P1W9 311 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 RPS6KA6Q9UK32 745 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 STRCP1A6NGW2 1772 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 RFXANKO14593 260 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 TMCC2O75069 709 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CAPNS1P04632 268 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 INHBBP09529 407 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CTSHP09668 335 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 COL6A1P12109 1028 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 TCF3P15923 654 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 TBX4P57082 545 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 HMGCS1Q01581 520 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 TAF12Q16514 161 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CPSF6Q16630 551 aaKnown RBP eCLIP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 DALRD3Q5D0E6 543 aaKnown RBP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 SPANXN4Q5MJ08 99 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 ZNF517Q6ZMY9 492 aaPredicted RBP8.88□□□□□ -0.99
CSMD1-212ENST00000523387 UBE2J2Q8N2K1 259 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 LIX1Q8N485 282 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 CAMKK1Q8N5S9 505 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 GRPEL2Q8TAA5 225 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 PIK3R3Q92569 461 aa8.88□□□□□ -0.99
CSMD1-212ENST00000523387 FCGR1BQ92637 280 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms