RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CEACAM20Q6UY09 585 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 FAM183BPQ6ZVS7 135 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 TTLL10Q6ZVT0 673 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 TMEM110Q86TL2 294 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 APLFQ8IW19 511 aaPredicted RBP6.28□□□□□ -1.4
VPS13B-211ENST00000522802 ARHGEF19Q8IW93 802 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 SLC34A3Q8N130 599 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 NAGSQ8N159 534 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 ESX1Q8N693 406 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 ARHGEF2Q92974 986 aaKnown RBP6.28□□□□□ -1.4
VPS13B-211ENST00000522802 ISG20Q96AZ6 181 aaKnown RBP6.28□□□□□ -1.4
VPS13B-211ENST00000522802 AHCYL2Q96HN2 611 aaKnown RBP6.28□□□□□ -1.4
VPS13B-211ENST00000522802 RANBP9Q96S59 729 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 CPXM1Q96SM3 734 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 RUFY1Q96T51 708 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 MENTQ9BUN1 341 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 TWSG1Q9GZX9 223 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 MLXIPLQ9NP71 852 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 ARHGEF38Q9NXL2 777 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 SIDT1Q9NXL6 827 aaKnown RBP6.28□□□□□ -1.4
VPS13B-211ENST00000522802 MAGEL2Q9UJ55 1249 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 MOSPD1Q9UJG1 213 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 ENTPD4Q9Y227 616 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 POLEQ07864 2286 aa6.28□□□□□ -1.4
VPS13B-211ENST00000522802 SVILO95425 2214 aa6.27□□□□□ -1.4
VPS13B-211ENST00000522802 A0A0A6YYK5 440 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 A6NCN8 305 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ALG1L2C9J202 215 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 CACNB4O00305 520 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 INSIG1O15503 277 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 STX10O60499 249 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 DAB1O75553 588 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 TMCC1O94876 653 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 CBX6O95503 412 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 YEATS4O95619 227 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ERBB2P04626 1255 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 EPB41P11171 864 aaKnown RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 GM2AP17900 193 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 HOXA5P20719 270 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 GPR3P46089 330 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 LEPRP48357 1165 aaKnown RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 RPS18P62269 152 aaKnown RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 IL10RAQ13651 578 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 POLD3Q15054 466 aaPredicted RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 PCOLCEQ15113 449 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 MYLK3Q32MK0 819 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ZRANB3Q5FWF4 1079 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ZMAT1Q5H9K5 638 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 PAPD7Q5XG87 772 aaKnown RBP6.27□□□□□ -1.41
VPS13B-211ENST00000522802 TMEM71Q6P5X7 295 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 RRAGAQ7L523 313 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 CEP57L1Q8IYX8 460 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 PPP1R14CQ8TAE6 165 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 SLC35C1Q96A29 364 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 LURAP1Q96LR2 239 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 GDAP1L1Q96MZ0 367 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 MED15Q96RN5 788 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ZPBPQ9BS86 351 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 SOX7Q9BT81 388 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 SLC25A23Q9BV35 468 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ACTL8Q9H568 366 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 C14orf119Q9NWQ9 140 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 PDP2Q9P2J9 529 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 ITGB1BP2Q9UKP3 347 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 NEU3Q9UQ49 428 aa6.27□□□□□ -1.41
VPS13B-211ENST00000522802 PKDREJQ9NTG1 2253 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 FAM170AA1A519 330 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 TSPAN11A1L157 253 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 PIPSLA2A3N6 862 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 ARGFXA6NJG6 315 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 SRGAP2O75044 1071 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 CREG1O75629 220 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 RECQL5O94762 991 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 RHOBTB3O94955 611 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 LETM1O95202 739 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 POP4O95707 220 aaKnown RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 CLEC2LP0C7M8 214 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 NFKBIAP25963 317 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 HNRNPH3P31942 346 aaKnown RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 CASP14P31944 242 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 MAN1A1P33908 653 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 GNPDA1P46926 289 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 PPM1FP49593 454 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 CXCR3P49682 368 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 MEOX1P50221 254 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 SNRPD1P62314 119 aaKnown RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 SLC20A2Q08357 652 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 ELP6Q0PNE2 266 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 ILF3Q12906 894 aaKnown RBP eCLIP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 RALGDSQ12967 914 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 BIRC2Q13490 618 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 ZXDCQ2QGD7 858 aaPredicted RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 CT83Q5H943 113 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 ZNF783Q6ZMS7 281 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 ARHGAP22Q7Z5H3 698 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 GUF1Q8N442 669 aaKnown RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 WDTC1Q8N5D0 677 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 RBMXL3Q8N7X1 1067 aaKnown RBP6.26□□□□□ -1.41
VPS13B-211ENST00000522802 CNTD1Q8N815 330 aa6.26□□□□□ -1.41
VPS13B-211ENST00000522802 SLC37A2Q8TED4 501 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms