RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 KLHL1Q9NR64 748 aa4.49□□□□□ -1.69
HMGB1P1-201ENST00000522557 OSER1Q9NX31 292 aa4.49□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF224Q9NZL3 707 aa4.49□□□□□ -1.69
HMGB1P1-201ENST00000522557 WNT16Q9UBV4 365 aa4.49□□□□□ -1.69
HMGB1P1-201ENST00000522557 RASAL2Q9UJF2 1139 aa4.49□□□□□ -1.69
HMGB1P1-201ENST00000522557 DLGAP4Q9Y2H0 992 aa4.49□□□□□ -1.69
HMGB1P1-201ENST00000522557 TEX13DA0A0J9YY54 714 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZCWPW2A0A1B0GU75 182 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PRSS51A0A1B0GVH4 220 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 LINC01553A4QN01 128 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 OR5K3A6NET4 321 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PRSS44E7EML9 344 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 SLC30A4O14863 429 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 KDM4BO94953 1096 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 GLUD1P00367 558 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 LDLRP01130 860 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PENKP01210 267 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 OR2T7P0C7T2 308 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 MYOD1P15172 320 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 GJA1P17302 382 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 GM2AP17900 193 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 CASTP20810 708 aaKnown RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 MPZP25189 248 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 GABRA5P31644 462 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PCGF2P35227 344 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 TCF7P36402 384 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 GLUD2P49448 558 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 CLDN15P56746 228 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 MAT1AQ00266 395 aaKnown RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 HSPB3Q12988 150 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 KEAP1Q14145 624 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 KRT33BQ14525 404 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF234Q14588 700 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 FAM122CQ6P4D5 195 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 NHLRC1Q6VVB1 395 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 RBM23Q86U06 439 aaKnown RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 GPR180Q86V85 440 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 SATL1Q86VE3 508 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 TMEM173Q86WV6 379 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 IQUBQ8NA54 791 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 OR14A16Q8NHC5 309 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 SLC38A5Q8WUX1 472 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 DNAAF4Q8WXU2 420 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 ROBO4Q8WZ75 1007 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 EXT2Q93063 718 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PTP4A1Q93096 173 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 SPSB1Q96BD6 273 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PHF21BQ96EK2 531 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 VMP1Q96GC9 406 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 RMDN2Q96LZ7 410 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 MTERF1Q99551 399 aaKnown RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 FEVQ99581 238 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 CITED2Q99967 270 aaPredicted RBP4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 SEZ6LQ9BYH1 1024 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 HHATLQ9HCP6 504 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 Q9N2K0 584 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 MYNNQ9NPC7 610 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 SMARCAL1Q9NZC9 954 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 NPAP1Q9NZP6 1156 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 LIPT1Q9Y234 373 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 AMDHD2Q9Y303 409 aa4.48□□□□□ -1.69
HMGB1P1-201ENST00000522557 PDS5AQ29RF7 1337 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 TRAV34A0A0B4J273 112 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 TMEM178BH3BS89 294 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 SERPINI2O75830 405 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 WDPCPO95876 746 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 SUPT20HL2P0C7V6 817 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 ATP5DP30049 168 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 GMPSP49915 693 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 PDLIM4P50479 330 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 DSC1Q08554 894 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 GCNT6Q5T4J0 391 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 CAPRIN2Q6IMN6 1127 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 PPP1R21Q6ZMI0 780 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF704Q6ZNC4 412 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 PIWIL3Q7Z3Z3 882 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 DSG4Q86SJ6 1040 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 FJX1Q86VR8 437 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF713Q8N859 430 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 C9orf43Q8TAL5 461 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 LMO3Q8TAP4 145 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 GDAP1Q8TB36 358 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 SLC20A1Q8WUM9 679 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 TANKQ92844 425 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 SECISBP2LQ93073 1101 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 INTS14Q96SY0 518 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 EGFL8Q99944 293 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 THUMPD3Q9BV44 507 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 LMAN1LQ9HAT1 526 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 GRPEL1Q9HAV7 217 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 ZNF701Q9NV72 531 aaPredicted RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 SIX4Q9UIU6 781 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 ABT1Q9ULW3 272 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 GRIP1Q9Y3R0 1128 aa4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 TCF20Q9UGU0 1960 aaKnown RBP4.47□□□□□ -1.69
HMGB1P1-201ENST00000522557 A0A1W2PPK0 400 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 HTR3EA5X5Y0 456 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 C5orf52A6NGY3 159 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 XRCC3O43542 346 aa4.46□□□□□ -1.7
HMGB1P1-201ENST00000522557 DIAPH2O60879 1101 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms