RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 IQCGQ9H095 443 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 NMRAL1Q9HBL8 299 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 FSCN3Q9NQT6 498 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CPSF2Q9P2I0 782 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 SMG5Q9UPR3 1016 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 CACNA1EQ15878 2313 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 ADAMTS9Q9P2N4 1935 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 LIN7AO14910 233 aaPredicted RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 SBK3P0C264 359 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CBSLP0DN79 551 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 GNSP15586 552 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 JUNDP17535 347 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CBSP35520 551 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 BNC1Q01954 994 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 C1orf61Q13536 156 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 TSNQ15631 228 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 LRRC8EQ6NSJ5 796 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 NRROSQ86YC3 692 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 SYT12Q8IV01 421 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 SLC22A15Q8IZD6 547 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 MYO1HQ8N1T3 1032 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 TMEM151AQ8N4L1 468 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 ARMC2Q8NEN0 867 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 CFAP61Q8NHU2 1237 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 DENND1AQ8TEH3 1009 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 GLMNQ92990 594 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 PDLIM5Q96HC4 596 aaKnown RBP13.11□□□□□ -0.31
CLK4-210ENST00000522136 ADAMTS6Q9UKP5 1117 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 SNX11Q9Y5W9 270 aa13.11□□□□□ -0.31
CLK4-210ENST00000522136 PRR19A6NJB7 356 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 H3BM21 787 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 TK2O00142 265 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 PLIN3O60664 434 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 SNX2O60749 519 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 PROCP04070 461 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 GSTM1P09488 218 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 GYS2P54840 703 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 GSTM4Q03013 218 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 DMPKQ09013 629 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 ACAP2Q15057 778 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 TEAD4Q15561 434 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 TSNAXIP1Q2TAA8 658 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 KIF19Q2TAC6 998 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 TECRLQ5HYJ1 363 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 SLC30A9Q6PML9 568 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 DLG3Q92796 817 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 KIAA1191Q96A73 305 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 WWP1Q9H0M0 922 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 OR52A5Q9H2C5 316 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 XPR1Q9UBH6 696 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 WDR37Q9Y2I8 494 aa13.1□□□□□ -0.31
CLK4-210ENST00000522136 PATE3B3GLJ2 98 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 EML2O95834 649 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 CSF2P04141 144 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 ENO3P13929 434 aaPredicted RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 VCLP18206 1134 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 ACTR1BP42025 376 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 ETV4P43268 484 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 CLCNKAP51800 687 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 NUBP1P53384 320 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 WDR4P57081 412 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 ACTR1AP61163 376 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 ATP6V0D1P61421 351 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 KLC3Q6P597 504 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 LVRNQ6Q4G3 990 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 CCDC63Q8NA47 563 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 EXT2Q93063 718 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 PAIP2Q9BPZ3 127 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 TRNAU1APQ9NX07 287 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 TBC1D29Q9UFV1 150 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 APOBEC3BQ9UH17 382 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 CFAP20Q9Y6A4 193 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 KRT87PA6NCN2 255 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 PRR5-ARHGAP8B1AHC4 643 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 POLR3GO15318 223 aaPredicted RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 CFIP05156 583 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 MPC1LP0DKB6 136 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 CTSEP14091 401 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 NME1P15531 152 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 CHN1P15882 459 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 CCDC6Q16204 474 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 PRRT3Q5FWE3 981 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 LCA5Q86VQ0 697 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 FAM76AQ8TAV0 307 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 GPBAR1Q8TDU6 330 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 ASB11Q8WXH4 323 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 SKA1Q96BD8 255 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 RMDN2Q96LZ7 410 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 LRRC61Q9BV99 259 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 UTP6Q9NYH9 597 aaKnown RBP13.09□□□□□ -0.31
CLK4-210ENST00000522136 NKIRAS1Q9NYS0 192 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 SUSD2Q9UGT4 822 aa13.09□□□□□ -0.31
CLK4-210ENST00000522136 CACNA1HO95180 2353 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 CABIN1Q9Y6J0 2220 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 WDR91A4D1P6 747 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 NEMP2A6NFY4 417 aa13.08□□□□□ -0.32
CLK4-210ENST00000522136 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms