RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 HECW2Q9P2P5 1572 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 CPSF1Q10570 1443 aaKnown RBP3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 FAM135BQ49AJ0 1406 aa3.19□□□□□ -1.9
HMGB1P41-201ENST00000520234 CDC42BPGQ6DT37 1551 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 LOC100509620A0A075B734 347 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZCWPW2A0A1B0GU75 182 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 A0A1W2PP11 408 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 A0A1W2PQ09 198 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 hCG_1807616A0A1W2PRN6 198 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 C15orf62A8K5M9 175 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 PRAC2D3DTV9 90 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 LDB3O75112 727 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 F7P08709 466 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 CDH1P12830 882 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 PORP16435 677 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 ITGA2P17301 1181 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 HRH2P25021 359 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 SLC15A1P46059 708 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 AMPHP49418 695 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 ERVFC1-1P60608 527 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 PLIN5Q00G26 463 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 ILF3Q12906 894 aaKnown RBP eCLIP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAGE2BQ13066 116 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAGE5Q13069 117 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAGE6Q13070 117 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 ACCSLQ4AC99 568 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAGE2EQ4V326 116 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 FAM109BQ6ICB4 259 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAGE2AQ6NT46 116 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GALNT5Q7Z7M9 940 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMPRSS12Q86WS5 348 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 SCYL3Q8IZE3 742 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 C17orf53Q8N3J3 647 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 METTL27Q8N6F8 245 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 IQUBQ8NA54 791 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 IL17RCQ8NAC3 791 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 RDM1Q8NG50 284 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GSDMBQ8TAX9 411 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 JAKMIP2Q96AA8 810 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 CALML4Q96GE6 196 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 RSRC1Q96IZ7 334 aaKnown RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 PRAM1Q96QH2 718 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 PCYT2Q99447 389 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 SRSF8Q9BRL6 282 aaKnown RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 LRRC1Q9BTT6 524 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 FUCA2Q9BTY2 467 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 OSGEPL1Q9H4B0 414 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 RAD21L1Q9H4I0 556 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 TCP11L1Q9NUJ3 509 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 PSD3Q9NYI0 1048 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 RCC2Q9P258 522 aaKnown RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 DNAJB4Q9UDY4 337 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 GAGE2DQ9UEU5 116 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 POLG2Q9UHN1 485 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 KCNG2Q9UJ96 466 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF112Q9UJU3 913 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 RALYQ9UKM9 306 aaKnown RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 OR2W1Q9Y3N9 320 aa3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 TRIP12Q14669 1992 aaPredicted RBP3.18□□□□□ -1.9
HMGB1P41-201ENST00000520234 MROH2AA6NES4 1674 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZC3H13Q5T200 1668 aaKnown RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 DIP2CQ9Y2E4 1556 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ATP7BP35670 1465 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 OR5K3A6NET4 321 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 CTDSP2O14595 271 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZBTB43O43298 467 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 AP5Z1O43299 807 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 BUB3O43684 328 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PLPP2O43688 288 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF217O75362 1048 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 KCNK5O95279 499 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 H2AFXP16104 143 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 SAT1P21673 171 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 GCH1P30793 250 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 FUT6P51993 359 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF132P52740 706 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PNLIPRP2P54317 469 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 MLLT10P55197 1068 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PITX1P78337 314 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 SPOCK1Q08629 439 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 NTRK2Q16620 822 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 MEP1AQ16819 746 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 C15orf59Q2T9L4 293 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ZNF672Q499Z4 452 aaPredicted RBP3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 BMP2KLQ5H9B9 411 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 KRT79Q5XKE5 535 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 TMEM198Q66K66 360 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 CTR9Q6PD62 1173 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 FOXL2NBQ6ZUU3 175 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 Q75L30 129 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 ATG9AQ7Z3C6 839 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 EGFL6Q8IUX8 553 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 HSCBQ8IWL3 235 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 MAB21L3Q8N8X9 362 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 POC5Q8NA72 575 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 BBS10Q8TAM1 723 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 SLC44A1Q8WWI5 657 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 CD101Q93033 1021 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
HMGB1P41-201ENST00000520234 PKP4Q99569 1192 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms