RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 VPS50Q96JG6 964 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 PDLIM2Q96JY6 352 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 ZNF599Q96NL3 588 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 AGAP4Q96P64 663 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 PLEKHG4BQ96PX9 1271 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 FOXC2Q99958 501 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 TIMM29Q9BSF4 260 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 KLC2Q9H0B6 622 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 ABCG8Q9H221 673 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 CXXC4Q9H2H0 198 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 OSGEPL1Q9H4B0 414 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 EPS8L2Q9H6S3 715 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 AKTIPQ9H8T0 292 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 AKIRIN1Q9H9L7 192 aaPredicted RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SP110Q9HB58 689 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SLC40A1Q9NP59 571 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 METTL5Q9NRN9 209 aaKnown RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 HOOK1Q9UJC3 728 aaKnown RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 KCNK6Q9Y257 313 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 FLNAP21333 2647 aaKnown RBP4.77□□□□□ -1.65
SDCBP-207ENST00000520168 HCFC1P51610 2035 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 SEC16AO15027 2179 aa4.77□□□□□ -1.65
SDCBP-207ENST00000520168 TRGV8A0A0C4DH27 118 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CCDC189A1A4V9 331 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GTPBP10A4D1E9 387 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 RGSL1A5PLK6 1076 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 C2CD4BA6NLJ0 364 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 PDZK1P1A8MUH7 402 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GOLGA8SH3BPF8 625 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 J3KR12 359 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 MASP2O00187 686 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 MATN2O00339 956 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 PCDH17O14917 1159 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 KMOO15229 486 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 KCNJ13O60928 360 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 DEAF1O75398 565 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 SMC2O95347 1197 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CLDN14O95500 239 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 FGFR1OPO95684 399 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 TPM3P06753 285 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CAPN1P07384 714 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 MYBL2P10244 700 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 VCLP18206 1134 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 SSTR4P31391 388 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 HNRNPH3P31942 346 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 OTX2P32243 289 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 FOLR3P41439 243 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 HALP42357 657 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 RGRP47804 291 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 TDGF1P3P51864 188 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 NDUFA8P51970 172 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ZNF135P52742 658 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 PMS1P54277 932 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 TPI1P60174 286 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GPR18Q14330 331 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 KCNAB1Q14722 419 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 INSCQ1MX18 579 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 C15orf59Q2T9L4 293 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CCDC14Q49A88 953 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 DNTTIP2Q5QJE6 756 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 PLEKHS1Q5SXH7 462 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ARMC12Q5T9G4 340 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 LRRC66Q68CR7 880 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 PDPK2PQ6A1A2 396 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 TRNP1Q6NT89 227 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 FAM198BQ6UWH4 519 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ABRAXAS1Q6UWZ7 409 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GFRALQ6UXV0 394 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GBP6Q6ZN66 633 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 BIVMQ86UB2 503 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 TRIM74Q86UV6 250 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ELOA2Q8IYF1 753 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 EID3Q8N140 333 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CCDC185Q8N715 623 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 NETO2Q8NC67 525 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 DNAJB8Q8NHS0 232 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 NR4A3Q92570 626 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GBP5Q96PP8 586 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 NUDCD1Q96RS6 583 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 TRIM56Q9BRZ2 755 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 MLPHQ9BV36 600 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 SLC7A5P2Q9GIP4 190 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ENKD1Q9H0I2 346 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 MRPL18Q9H0U6 180 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ACTR5Q9H9F9 607 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 SRA1Q9HD15 236 aaKnown RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 KLC4Q9NSK0 619 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 HAUS2Q9NVX0 235 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 ZFATQ9P243 1243 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 GPN3Q9UHW5 284 aaPredicted RBP4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CD84Q9UIB8 345 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 EDARQ9UNE0 448 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 BTRCQ9Y297 605 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 SPTBP11277 2137 aa4.76□□□□□ -1.65
SDCBP-207ENST00000520168 CNTRLQ7Z7A1 2325 aa4.75□□□□□ -1.65
SDCBP-207ENST00000520168 PRRC2AP48634 2157 aaKnown RBP4.75□□□□□ -1.65
SDCBP-207ENST00000520168 OR5K3A6NET4 321 aa4.75□□□□□ -1.65
SDCBP-207ENST00000520168 E7EQ34 232 aa4.75□□□□□ -1.65
SDCBP-207ENST00000520168 AGPSO00116 658 aa4.75□□□□□ -1.65
SDCBP-207ENST00000520168 PPP1R12AO14974 1030 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms