RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 RFXANKO14593 260 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 LPOP22079 712 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 LAPTM4BQ86VI4 370 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 HJURPQ8NCD3 748 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 GALNT11Q8NCW6 608 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 RDH11Q8TC12 318 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 CERKQ8TCT0 537 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 CPNE2Q96FN4 548 aaPredicted RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 AMBNQ9NP70 447 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 ACOX3O15254 700 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 XPNPEP2O43895 674 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 MATN1P21941 496 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 PRKCIP41743 596 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 PIK3CBP42338 1070 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 S100A10P60903 97 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 NPTX1Q15818 432 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 LYPLAL1Q5VWZ2 237 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 GLYATQ6IB77 296 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 ALKBH2Q6NS38 261 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 OR4L1Q8NH43 312 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 CKLFQ9UBR5 152 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 ADGRB2O60241 1585 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 ITM2AO43736 263 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 PLIN3O60664 434 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 RP2O75695 350 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 ERBB2P04626 1255 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 POLR2JP52435 117 aaKnown RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 FAM214AQ32MH5 1076 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 C4orf46Q504U0 113 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 CELF3Q5SZQ8 465 aaKnown RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 NKD1Q969G9 470 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 PURBQ96QR8 312 aaKnown RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 AGO1Q9UL18 857 aaKnown RBP8.59□□□□□ -1.03
CSMD1-206ENST00000520002 RTTNQ86VV8 2226 aa8.59□□□□□ -1.03
CSMD1-206ENST00000520002 CLIC3O95833 236 aa8.59□□□□□ -1.04
CSMD1-206ENST00000520002 AMD1P17707 334 aa8.59□□□□□ -1.04
CSMD1-206ENST00000520002 MAP1SQ66K74 1059 aaPredicted RBP8.59□□□□□ -1.04
CSMD1-206ENST00000520002 RNF157Q96PX1 679 aa8.59□□□□□ -1.04
CSMD1-206ENST00000520002 OAZ3Q9UMX2 235 aa8.59□□□□□ -1.04
CSMD1-206ENST00000520002 ST3GAL5Q9UNP4 418 aa8.59□□□□□ -1.04
CSMD1-206ENST00000520002 LRRC42Q9Y546 428 aa8.59□□□□□ -1.04
CSMD1-206ENST00000520002 OIP5O43482 229 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CKMT2P17540 419 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ITPKAP23677 461 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 SRSF11Q05519 484 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CCDC58Q4VC31 144 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CLEC6AQ6EIG7 209 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 APOBEC3HQ6NTF7 200 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PAOXQ6QHF9 649 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 UNC93AQ86WB7 457 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 OR10G6Q8NH81 332 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PRDM12Q9H4Q4 367 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 SLC7A8Q9UHI5 535 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ZNF639Q9UID6 485 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 SPATA31A6Q5VVP1 1343 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 SEC16AO15027 2179 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ERAL1O75616 437 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 AKR1A1P14550 325 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ARFIP1P53367 373 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 RPS3AP61247 264 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CXCL9Q07325 125 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PTGES3Q15185 160 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 TMEM17Q86X19 198 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 STON2Q8WXE9 905 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ACO2Q99798 780 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 WDR18Q9BV38 432 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 FER1L6Q2WGJ9 1857 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 SLC28A1O00337 649 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 TXNL1O43396 289 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 DBIP07108 87 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PVALBP20472 110 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 KRBOX4Q5JUW0 171 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CPSF7Q8N684 471 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ANKRD52Q8NB46 1076 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 OR6K2Q8NGY2 324 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 TSEN15Q8WW01 171 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 TCEAL3Q969E4 200 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 TIMM8BQ9Y5J9 83 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 GMFGO60234 142 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PRDX6P30041 224 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 RAB5BP61020 215 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PIGZQ86VD9 579 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ZC3HC1Q86WB0 502 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CMTR2Q8IYT2 770 aaKnown RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 EBF4Q9BQW3 602 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 IFT46Q9NQC8 304 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 C5orf60A6NFR6 353 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 FGF1P05230 155 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PTPRAP18433 802 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CDH12P55289 794 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ILF3Q12906 894 aaKnown RBP eCLIP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 MYLK3Q32MK0 819 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 PHF13Q86YI8 300 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 NEK7Q8TDX7 302 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 FAM84AQ96KN4 292 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 CST11Q9H112 138 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 SEMA3GQ9NS98 782 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 LGALS13Q9UHV8 139 aa8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ZNF214Q9UL59 606 aaPredicted RBP8.58□□□□□ -1.04
CSMD1-206ENST00000520002 ZNF780BQ9Y6R6 833 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms