RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 EPYCQ99645 322 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 C16orf70Q9BSU1 422 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 RSPH9Q9H1X1 276 aaPredicted RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 APOBEC3GQ9HC16 384 aaKnown RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 TCF7L2Q9NQB0 619 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 MBNL1Q9NR56 388 aaKnown RBP3.47□□□□□ -1.85
VPS13B-207ENST00000518569 NPAP1Q9NZP6 1156 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 TAAR2Q9P1P5 351 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 IL17BQ9UHF5 180 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 FAM169AQ9Y6X4 670 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 CECR2Q9BXF3 1484 aa3.47□□□□□ -1.85
VPS13B-207ENST00000518569 IFITM10A6NMD0 228 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 IPO8O15397 1037 aaKnown RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 FIBPO43427 364 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 TSPAN1O60635 241 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 LMX1BO60663 402 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 MED24O75448 989 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 ZWINTO95229 277 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 ABCB1P08183 1280 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 FGF5P12034 268 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 PHEXP78562 749 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 MBTD1Q05BQ5 628 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 DMP1Q13316 513 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 TOMM20Q15388 145 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 CBWD6Q4V339 395 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 BMP2KLQ5H9B9 411 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 CBWD3Q5JTY5 395 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 GRTP1Q5TC63 336 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 MFSD4BQ5TF39 518 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 TRMT1LQ7Z2T5 733 aaKnown RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 DCUN1D3Q8IWE4 304 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 CIARTQ8N365 385 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 AFAP1Q8N556 730 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 LSMEM1Q8N8F7 131 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 POGLUT1Q8NBL1 392 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 KLHDC9Q8NEP7 349 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 EXD1Q8NHP7 514 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 SECISBP2LQ93073 1101 aaKnown RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 ARSGQ96EG1 525 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 SGK494Q96LW2 274 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 MS4A10Q96PG2 267 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 ABHD1Q96SE0 405 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 SLF1Q9BQI6 1058 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 APOL6Q9BWW8 343 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 TFB2MQ9H5Q4 396 aaKnown RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 UPF2Q9HAU5 1272 aaKnown RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF334Q9HCZ1 680 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 SLC38A7Q9NVC3 462 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 ANAPC2Q9UJX6 822 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 NAP1L2Q9ULW6 460 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 GRIP1Q9Y3R0 1128 aa3.46□□□□□ -1.86
VPS13B-207ENST00000518569 MAGED1Q9Y5V3 778 aaPredicted RBP3.46□□□□□ -1.86
VPS13B-207ENST00000518569 PRSS51A0A1B0GVH4 220 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 hCG_1809904A0A1W2PP81 198 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 A0A1W2PPE2 198 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 A0A1W2PR64 198 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 TIMM44O43615 452 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 BCL10O95999 233 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 UMODP07911 640 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 CKMT2P17540 419 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 NR1D1P20393 614 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 DCTP40126 519 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 MATR3P43243 847 aaKnown RBP eCLIP3.45□□□□□ -1.862e-6■■■■□ 23.9
VPS13B-207ENST00000518569 UBXN2AP68543 259 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 PNRC1Q12796 327 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 PLA2G7Q13093 441 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 KCTD2Q14681 263 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 SNAPC1Q16533 368 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 STPG1Q5TH74 334 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 SLC27A1Q6PCB7 646 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 TEX38Q6PEX7 206 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 FIGLAQ6QHK4 219 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 DENND5BQ6ZUT9 1274 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 FBXO39Q8N4B4 442 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 CPSF7Q8N684 471 aaKnown RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 ZNF473Q8WTR7 871 aaKnown RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 DNASE2BQ8WZ79 361 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 DAZLQ92904 295 aaKnown RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 PTERQ96BW5 349 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 ALG14Q96F25 216 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 DGAT2Q96PD7 388 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 NODALQ96S42 347 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 BTBD10Q9BSF8 475 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 ABHD6Q9BV23 337 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 KLHL4Q9C0H6 718 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 CLIC5Q9NZA1 410 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 RHCGQ9UBD6 479 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 DDX25Q9UHL0 483 aaKnown RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 ACAD8Q9UKU7 415 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 NOL7Q9UMY1 257 aaKnown RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 FAF1Q9UNN5 650 aaPredicted RBP3.45□□□□□ -1.86
VPS13B-207ENST00000518569 BICRAQ9NZM4 1560 aa3.45□□□□□ -1.86
VPS13B-207ENST00000518569 A0A0B4J293 547 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 FAM72CH0Y354 149 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 MSH3P20585 1137 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 CBLP22681 906 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 SLC6A6P31641 620 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 PSMC4P43686 418 aa3.44□□□□□ -1.86
VPS13B-207ENST00000518569 RPS18P62269 152 aaKnown RBP3.44□□□□□ -1.86
VPS13B-207ENST00000518569 NUCB1Q02818 461 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms