RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 HP1BP3Q5SSJ5 553 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-217ENST00000518538 TMEM71Q6P5X7 295 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 UNC5AQ6ZN44 842 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 ZNF574Q6ZN55 896 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-217ENST00000518538 DENND6AQ8IWF6 608 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 KRT222Q8N1A0 295 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 GABPB2Q8TAK5 448 aaPredicted RBP21.47■■□□□ 1.03
VEGFA-217ENST00000518538 TMEM159Q96B96 161 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 ZMYND15Q9H091 742 aa21.47■■□□□ 1.03
VEGFA-217ENST00000518538 CCDC187A0A096LP49 1063 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 IGHV5-10-1A0A0J9YXX1 117 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 TMEM8BA6NDV4 472 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 AOAHP28039 575 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 FMO4P31512 558 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 SLC1A2P43004 574 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 LIMK2P53671 638 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CAV1Q03135 178 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 EIF3IQ13347 325 aaKnown RBP21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CTBP1Q13363 440 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 HSP90AA5PQ58FG0 334 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 ZNF789Q5FWF6 425 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 PHF19Q5T6S3 580 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 STEAP4Q687X5 459 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 NAPRTQ6XQN6 538 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 UNC5BQ8IZJ1 945 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 MMGT1Q8N4V1 131 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 ASZ1Q8WWH4 475 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 NCSTNQ92542 709 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CFAP36Q96G28 342 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CNTNAP3BQ96NU0 1288 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 LRRC1Q9BTT6 524 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CNTNAP3Q9BZ76 1288 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 KIR3DX1Q9H7L2 352 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 POLR1BQ9H9Y6 1135 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 PLAC1Q9HBJ0 212 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 OGFRQ9NZT2 677 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 PDP2Q9P2J9 529 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 FBXO5Q9UKT4 447 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CRYL1Q9Y2S2 319 aa21.46■■□□□ 1.03
VEGFA-217ENST00000518538 CTAGE15A4D2H0 777 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 BHMG1C9JSJ3 638 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-217ENST00000518538 KPNA5O15131 536 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 GPC4O75487 556 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 APOA4P06727 396 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 PROS1P07225 676 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CTAGE8P0CG41 777 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 ERVK-10P10266 1014 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 THRAP10827 490 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 AMD1P17707 334 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 ACADLP28330 430 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 LSSP48449 732 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 GABREP78334 506 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 TRA2AQ13595 282 aaKnown RBP eCLIP21.45■■□□□ 1.022e-8■□□□□ 9.9
VEGFA-217ENST00000518538 KRT33BQ14525 404 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 PLCL1Q15111 1095 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 TMED2Q15363 201 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 C3orf38Q5JPI3 329 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CTAGE6Q86UF2 777 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CTAGE4Q8IX94 777 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 FBXO36Q8NEA4 188 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 WDR36Q8NI36 951 aaKnown RBP21.45■■□□□ 1.02
VEGFA-217ENST00000518538 TFGQ92734 400 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-217ENST00000518538 ART4Q93070 314 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CERS2Q96G23 380 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CCDC74BQ96LY2 380 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 FERD3LQ96RJ6 166 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CCDC86Q9H6F5 360 aaKnown RBP21.45■■□□□ 1.02
VEGFA-217ENST00000518538 MVB12BQ9H7P6 319 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 FBXO6Q9NRD1 293 aaPredicted RBP21.45■■□□□ 1.02
VEGFA-217ENST00000518538 IARS2Q9NSE4 1012 aaKnown RBP21.45■■□□□ 1.02
VEGFA-217ENST00000518538 TMEM9Q9P0T7 183 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 DKK4Q9UBT3 224 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 SLC24A2Q9UI40 661 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 SATB2Q9UPW6 733 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 CDYLQ9Y232 598 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 AK5Q9Y6K8 562 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 KNTC1P50748 2209 aa21.45■■□□□ 1.02
VEGFA-217ENST00000518538 UNC13CQ8NB66 2214 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 A0A1W2PNU3 283 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-217ENST00000518538 EIF3HO15372 352 aaKnown RBP eCLIP21.44■■□□□ 1.028e-40■□□□□ 9.1
VEGFA-217ENST00000518538 CAPNS1P04632 268 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 MPOP05164 745 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 PKMP14618 531 aaKnown RBP21.44■■□□□ 1.02
VEGFA-217ENST00000518538 TYRP1P17643 537 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 CAPZBP47756 277 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 SLC7A5Q01650 507 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 CYP4F3Q08477 520 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 HSPA14Q0VDF9 509 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 FRG1Q14331 258 aaKnown RBP21.44■■□□□ 1.02
VEGFA-217ENST00000518538 FASTKD3Q14CZ7 662 aaKnown RBP21.44■■□□□ 1.02
VEGFA-217ENST00000518538 RAB11FIP2Q7L804 512 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 PLXDC1Q8IUK5 500 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 ANKMY2Q8IV38 441 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 CNTN4Q8IWV2 1026 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 SLC22A15Q8IZD6 547 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 C2CD4AQ8NCU7 369 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-217ENST00000518538 ACVR1CQ8NER5 493 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 PCDHGA8Q9Y5G5 932 aa21.44■■□□□ 1.02
VEGFA-217ENST00000518538 MN1Q10571 1320 aaPredicted RBP21.44■■□□□ 1.02
VEGFA-217ENST00000518538 HGSO14964 777 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms