RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 C2orf54Q08AI8 447 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CNTN1Q12860 1018 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 RALGDSQ12967 914 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 NFATC3Q12968 1075 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 GPS1Q13098 491 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CALCOCO2Q13137 446 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 MSLNQ13421 630 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 MTM1Q13496 603 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 SNX1Q13596 522 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CUL1Q13616 776 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 FRG1Q14331 258 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 IHHQ14623 411 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 SSPNQ14714 243 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 PDCD1Q15116 288 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 PCBP2Q15366 365 aaKnown RBP eCLIP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ANGPT1Q15389 498 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 PPP1R7Q15435 360 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 TAF1AQ15573 450 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ZNF124Q15973 351 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CNGA3Q16281 694 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CDKN3Q16667 212 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 TMEM52BQ4KMG9 183 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 USP39Q53GS9 565 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 DNAJC21Q5F1R6 531 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 PCID2Q5JVF3 399 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 DNTTIP2Q5QJE6 756 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CFAP58Q5T655 872 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ATXN7L2Q5T6C5 722 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 IZUMO3Q5VZ72 239 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 PMS2CLQ68D20 193 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 KIAA0930Q6ICG6 404 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ANO7Q6IWH7 933 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CCDC70Q6NSX1 233 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 HIBCHQ6NVY1 386 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ERAP2Q6P179 960 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 WDR93Q6P2C0 686 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 LRRC8BQ6P9F7 803 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 KIAA1324Q6UXG2 1013 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 UNQ6494/PRO21346Q6UXR6 183 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 KYAT3Q6YP21 454 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 LEKR1Q6ZMV7 388 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CYS1Q717R9 158 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ZNF534Q76KX8 674 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CXXC5Q7LFL8 322 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 NLRP9Q7RTR0 991 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 GSTA5Q7RTV2 222 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 RABEPKQ7Z6M1 372 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 GALNT7Q86SF2 657 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 TMEM135Q86UB9 458 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 IQCHQ86VS3 1027 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 HORMAD1Q86X24 394 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CXorf67Q86X51 503 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 FAM129CQ86XR2 697 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 MMAAQ8IVH4 418 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 KLHL7Q8IXQ5 586 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 LMNTD2Q8IXW0 634 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 TMEFF1Q8IYR6 380 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 MPP5Q8N3R9 675 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 RYBPQ8N488 228 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 TTC30BQ8N4P2 665 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 HDDC3Q8N4P3 179 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ZCCHC9Q8N567 271 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CCDC33Q8N5R6 958 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 AADATQ8N5Z0 425 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ZNF366Q8N895 744 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 DTX3Q8N9I9 347 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 GLIS1Q8NBF1 620 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 NOA1Q8NC60 698 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 LPCAT1Q8NF37 534 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 OR2T34Q8NGX1 318 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 OR6K2Q8NGY2 324 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 SPATA22Q8NHS9 363 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 BRSK1Q8TDC3 778 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CXorf40AQ8TE69 158 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 STYXQ8WUJ0 223 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 HMGB4Q8WW32 186 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 GAB3Q8WWW8 586 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 DNASE2BQ8WZ79 361 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 CPT1BQ92523 772 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ARRDC3Q96B67 414 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 FOXRED1Q96CU9 486 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 DTD2Q96FN9 168 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 SNF8Q96H20 258 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 RAX2Q96IS3 184 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 LOXL4Q96JB6 756 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 ZC3H10Q96K80 434 aaKnown RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 HIST1H2AHQ96KK5 128 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 COQ10AQ96MF6 247 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 NSMCE3Q96MG7 304 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 KLHL32Q96NJ5 620 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 SERPINB12Q96P63 405 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 LENG8Q96PV6 779 aaPredicted RBP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 PLEKHG4BQ96PX9 1271 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 VPS35Q96QK1 796 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 RBM15Q96T37 977 aaKnown RBP eCLIP2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 KRT12Q99456 494 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 FMO2Q99518 471 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 FOXB1Q99853 325 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 HIST1H2AJQ99878 128 aa2.18□□□□□ -2.06
SCARNA16.3-201ENST00000516595 FAM118BQ9BPY3 351 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms