RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 HSPB2Q16082 182 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 IL17AQ16552 155 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RABL6Q3YEC7 729 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ASPRV1Q53RT3 343 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ZNF311Q5JNZ3 666 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RRAGBQ5VZM2 374 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MRNIPQ6NTE8 343 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 SLC25A47Q6Q0C1 308 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 CPEB2Q7Z5Q1 589 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 SPATS2Q86XZ4 545 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 NRROSQ86YC3 692 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 LURAP1LQ8IV03 231 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ADGRF5Q8IZF2 1346 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 DNAJC22Q8N4W6 341 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 AFAP1L2Q8N4X5 818 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 GJC3Q8NFK1 279 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 RDM1Q8NG50 284 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 OR6S1Q8NH40 331 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 PHKBQ93100 1093 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 OTULINQ96BN8 352 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MRRFQ96E11 262 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 C18orf15Q96N68 181 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 TUBGCP6Q96RT7 1819 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 SERINC2Q96SA4 455 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 STACQ99469 402 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 NUP88Q99567 741 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 OVOL2Q9BRP0 275 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 PAXXQ9BUH6 204 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MECRQ9BV79 373 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ULBP2Q9BZM5 246 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 HEYLQ9NQ87 328 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 SAMSN1Q9NSI8 373 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 CUTCQ9NTM9 273 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 DHDHQ9UQ10 334 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 MTF2Q9Y483 593 aaPredicted RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 WIPI2Q9Y4P8 454 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 WSB1Q9Y6I7 421 aa-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 LRP1Q07954 4544 aaKnown RBP-1.02□□□□□ -2.57
RNU6-542P-201ENST00000516405 ARID2Q68CP9 1835 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 ARHGEF40Q8TER5 1519 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 IGHV3-16A0A0C4DH30 117 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 IGHV3-38A0A0C4DH36 116 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 A8MX80 341 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 GRM8O00222 908 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 EMC8O43402 210 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 UBXN7O94888 489 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 MYBL2P10244 700 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 PCP11498 1178 aaKnown RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 TNFAIP3P21580 790 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 MDH2P40926 338 aaKnown RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 RCAN1P53805 252 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 ALKBH1Q13686 389 aaKnown RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 PRKG1Q13976 671 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 GRM4Q14833 912 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 SS18Q15532 418 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 MPPED2Q15777 294 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 ABCB5Q2M3G0 1257 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 FBXO43Q4G163 708 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 SLC22A6Q4U2R8 563 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 SYCP2LQ5T4T6 812 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 C18orf63Q68DL7 685 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 C16orf86Q6ZW13 317 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 FASTKD5Q7L8L6 764 aaKnown RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 PLPPR4Q7Z2D5 763 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 ATG9AQ7Z3C6 839 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 GALNT7Q86SF2 657 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 ADGRG6Q86SQ4 1221 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 RNF130Q86XS8 419 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 TGIF2LYQ8IUE0 185 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 SAXO1Q8IYX7 474 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 BEST3Q8N1M1 668 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 CNTD1Q8N815 330 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 THAP6Q8TBB0 222 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 WDR66Q8TBY9 1149 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 KIAA1524Q8TCG1 905 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 MAPK15Q8TD08 544 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 IPCEF1Q8WWN9 437 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 GRAMD2BQ96HH9 432 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 NECTIN4Q96NY8 510 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 SIGLEC12Q96PQ1 595 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 GFI1Q99684 422 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 PNNQ9H307 717 aaKnown RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 CCDC134Q9H6E4 229 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 PPP1R3EQ9H7J1 279 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 MAN2C1Q9NTJ4 1040 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 DHRS4-AS1Q9P1J3 65 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 LZTS1Q9Y250 596 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 PRG3Q9Y2Y8 225 aaPredicted RBP-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 CLDN16Q9Y5I7 305 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 MRFAP1Q9Y605 127 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 HMCN2Q8NDA2 5059 aa-1.03□□□□□ -2.57
RNU6-542P-201ENST00000516405 CR1P17927 2039 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 PNMA6EA0A0J9YXQ4 647 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 A0A1B0GW55 424 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 TYW5A2RUC4 315 aaKnown RBP-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 FBLL1A6NHQ2 334 aaKnown RBP-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 SRPX2O60687 465 aaPredicted RBP-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DANCRP0C864 163 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DUX4L2P0CJ85 424 aa-1.04□□□□□ -2.58
RNU6-542P-201ENST00000516405 DUX4L3P0CJ86 424 aa-1.04□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms