RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 PHF21AQ96BD5 680 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 SPSB1Q96BD6 273 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 DHX58Q96C10 678 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 BICD1Q96G01 975 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 FAM81BQ96LP2 452 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 SGK494Q96LW2 274 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 C3orf30Q96M34 536 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 ZNF778Q96MU6 729 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 OLFM1Q99784 485 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 FERMT1Q9BQL6 677 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 THUMPD3Q9BV44 507 aaKnown RBP3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 SEZ6LQ9BYH1 1024 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 GAREM1Q9H706 876 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 ABT1Q9ULW3 272 aaKnown RBP3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 SNX7Q9UNH6 387 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 B3GALT5Q9Y2C3 310 aa3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 PDS5AQ29RF7 1337 aaKnown RBP3.17□□□□□ -1.9
RNU6-390P-201ENST00000516259 A0A0B4J293 547 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 A0A0G2JNG1 304 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 A0A1W2PS18 150 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 NEMP2A6NFY4 417 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ZNF587BE7ETH6 402 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 PLK4O00444 970 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 CLIC2O15247 247 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 XRCC3O43542 346 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 KDM4BO94953 1096 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 IGHV2-70P01814 119 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ATP5BP06576 529 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 H1F0P07305 194 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ZFYP08048 801 aaPredicted RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 OR52Z1P0C646 297 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 POLR2CP19387 275 aaPredicted RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 PTPN3P26045 913 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 AHRP35869 848 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ARCN1P48444 511 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 CAPZA1P52907 286 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TUBB4BP68371 445 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TROAPQ12815 778 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 MYBPHQ13203 477 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ITGA7Q13683 1181 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 GTF2H2Q13888 395 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 KIR2DS5Q14953 304 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 MORF4L2Q15014 288 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 MEP1BQ16820 701 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 SFMBT2Q5VUG0 894 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ALS2CLQ60I27 953 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 KRT39Q6A163 491 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 GTF2H2CQ6P1K8 395 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 KLC3Q6P597 504 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 NOTUMQ6P988 496 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 RHBDF2Q6PJF5 856 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 LINC00696Q6ZRV3 163 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TMEM219Q86XT9 240 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 FAM9BQ8IZU0 186 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 CCAR2Q8N163 923 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 FBXL14Q8N1E6 418 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 CPSF7Q8N684 471 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 SMG7Q92540 1137 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 FIG4Q92562 907 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 SECISBP2LQ93073 1101 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 VOPP1Q96AW1 172 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 MOB3AQ96BX8 217 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 NXNL1Q96CM4 212 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 SPDL1Q96EA4 605 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TMEM19Q96HH6 336 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TMEM204Q9BSN7 226 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 KRTAP17-1Q9BYP8 105 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 LRMDAQ9H2I8 198 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 DPAGT1Q9H3H5 408 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 SLA2Q9H6Q3 261 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 MRPL44Q9H9J2 332 aaKnown RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 COPS7BQ9H9Q2 264 aaPredicted RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 GRPEL1Q9HAV7 217 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 CD93Q9NPY3 652 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 ZNF701Q9NV72 531 aaPredicted RBP3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 NPAP1Q9NZP6 1156 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 RHCGQ9UBD6 479 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 CDH7Q9ULB5 785 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 VDAC3Q9Y277 283 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TRIM17Q9Y577 477 aa3.16□□□□□ -1.9
RNU6-390P-201ENST00000516259 TRAV34A0A0B4J273 112 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 PRSS51A0A1B0GVH4 220 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 OOEPA6NGQ2 149 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 OR6C76A6NM76 312 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 SRRM3A6NNA2 597 aaPredicted RBP3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 ENO4A6NNW6 628 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 DNM1LO00429 736 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 WDR1O75083 606 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 BMP10O95393 424 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 WDPCPO95876 746 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 INHBAP08476 426 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 MYOD1P15172 320 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 EPCAMP16422 314 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 SCP2P22307 547 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 CBLP22681 906 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 LHX1P48742 406 aa3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 HNRNPKP61978 463 aaKnown RBP eCLIP3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 MAT1AQ00266 395 aaKnown RBP3.15□□□□□ -1.91
RNU6-390P-201ENST00000516259 LTBQ06643 244 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms